Bacillus megaterium WSH-002: BMWSH_4964
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Entry
BMWSH_4964 CDS
T01890
Symbol
dnaX
Name
(GenBank) DNA polymerase III (Gamma and tau subunits)
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bmh
Bacillus megaterium WSH-002
Pathway
bmh03030
DNA replication
bmh03430
Mismatch repair
bmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMWSH_4964 (dnaX)
03430 Mismatch repair
BMWSH_4964 (dnaX)
03440 Homologous recombination
BMWSH_4964 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmh03032
]
BMWSH_4964 (dnaX)
03400 DNA repair and recombination proteins [BR:
bmh03400
]
BMWSH_4964 (dnaX)
Enzymes [BR:
bmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMWSH_4964 (dnaX)
DNA replication proteins [BR:
bmh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMWSH_4964 (dnaX)
DNA repair and recombination proteins [BR:
bmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMWSH_4964 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
AAA_22
TIP49
DnaX_C
AAA_19
AAA_5
Rad17
AAA_16
RCF1-5-like_lid
PIF1
AAA_assoc_2
AAA_18
AAA_24
AAA_11
AAA_14
AAA_2
Mg_chelatase
AAA_7
AAA_28
RNA_helicase
TsaE
nSTAND3
DNA_pol3_delta_C
ABC2_membrane_7
Motif
Other DBs
NCBI-ProteinID:
AEN91842
UniProt:
A0A8D3X4Y9
LinkDB
All DBs
Position
complement(4741963..4743651)
Genome browser
AA seq
562 aa
AA seq
DB search
MAYQALYRVYRPQSFNDVVGQQHIIKTLQNALVQEKFSHAYLFSGPRGTGKTTAAKILAK
AVNCEKAPIAEPCNECATCRGITDGSISDVIEIDAASNNGVDEIRDIRDKVKYAPSAVRY
KVYIIDEVHMLSIGAFNALLKTLEEPPAHVIFILATTEPHKIPLTIISRCQRFDFKRISP
EDIVYRMKEVLGSEELEVSEDALYEIAKASEGGMRDALSLLDQAISYSTEKVSLEDVLSI
TGAVSQAFIVKIVQAIFNENIVEALDSVESLIKNGKDPARFVEDLIFYYRDVLLYQASEE
NAYLLEKAAVNEEFKELSSKMDSAFIYKVIAELNQTQQEMKWSNHPRVLLEVALVKLAQS
STNQESDLPYQDILQKMNQMEAELQQLKEKGIQVDHTAQAAQTEKKQTRQSRSQYKTPVG
KVNEVLKNATRQNLETIKRSWAQVLDTLKQQNKASHAALLSNSEPVASSDQSFILKFKYE
IHCKMASENNNNVRDNLENILYTLIGSKREMVAIPESEWDKVREEFLQGQQSDGASGQPQ
EEDPVVAEAKKLFGEDLIEIQE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtggcatatcaggctctgtaccgtgtataccgtcctcaaagctttaacgacgtagtcggt
caacaacatattatcaaaacacttcaaaatgcccttgtccaagagaaattttcgcatgcg
tatttattttctgggcctcgagggacaggaaagacaacagctgctaaaattttagcgaaa
gccgttaactgtgaaaaagcacccattgctgaaccttgtaatgaatgtgcaacttgtcgg
gggattactgatggttctatttctgatgtaattgaaattgatgcagcctctaataatgga
gtcgatgaaattcgagatatccgtgacaaagtaaaatatgcacctagtgctgttcgatac
aaagtgtacattattgatgaagttcatatgctttcaattggagcttttaacgctttgtta
aaaacgttggaagaacctcctgcacatgttatctttattttagctacaacagagccgcat
aaaattccattaacgattatctctagatgccagcgctttgatttcaaacgcatttcgcca
gaagatatcgtatatcgaatgaaggaagtattaggttctgaagagctagaagtaagcgag
gatgctctttacgaaattgcgaaagcttcagaaggcggcatgcgtgatgcacttagcctt
ttagaccaagccatctcgtatagtacggagaaggtgagcttagaggatgttctatctata
acaggagcagtatcacaggcttttattgtgaagatcgtccaagctatttttaacgaaaac
attgtagaagcgctagactctgttgaaagtttgatcaaaaacggaaaagacccagcgagg
tttgtagaggacctcatcttctattatcgtgatgttctgctttatcaagcttctgaagaa
aatgcatatttacttgaaaaagcagcggttaacgaagagtttaaagaactcagttcaaaa
atggatagtgcctttatttataaagtcattgctgaattgaaccaaactcagcaagagatg
aaatggagcaatcatcctcgagtgctacttgaagtagctttagtaaaattagctcaaagt
tctacaaatcaagagagtgaccttccatatcaagacattttgcaaaaaatgaatcaaatg
gaagcagaactgcagcagttaaaagaaaaaggcattcaagttgatcatacagctcaggca
gcgcaaacagagaaaaaacagacaagacagtcaagaagtcagtataaaacgcctgttggg
aaggtaaatgaagttttaaaaaatgccactcggcagaatttagaaacgattaagcgatct
tgggcgcaggtgttagacacattgaaacaacaaaataaagcttcacatgcagcgttgtta
tctaacagtgaaccagttgcgtcttcagatcaatcatttatactaaaatttaaatatgaa
attcattgcaaaatggcttctgaaaataacaacaatgtacgtgataatttagagaatatc
ttatatactttaattggcagcaagcgtgaaatggttgcaattccagaaagcgaatgggat
aaagtaagagaagagtttcttcaaggacagcaaagtgatggggcatcaggtcaaccacag
gaggaagaccctgtggttgcagaagcgaaaaagctatttggagaagacttaatcgaaatt
caagagtaa
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