Bacillus megaterium WSH-002: BMWSH_5011
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Entry
BMWSH_5011 CDS
T01890
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bmh
Bacillus megaterium WSH-002
Pathway
bmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMWSH_5011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmh03019
]
BMWSH_5011
03009 Ribosome biogenesis [BR:
bmh03009
]
BMWSH_5011
Enzymes [BR:
bmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMWSH_5011
Messenger RNA biogenesis [BR:
bmh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMWSH_5011
Ribosome biogenesis [BR:
bmh03009
]
Prokaryotic type
rRNA helicases
BMWSH_5011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEN91889
UniProt:
A0A8D4DZC0
LinkDB
All DBs
Position
complement(4799125..4800579)
Genome browser
AA seq
484 aa
AA seq
DB search
MGFEEATPIQSETIPLALEGHDLIGQAQTGTGKTAAFGIPLIEKVDVNVDAIQGLIIAPT
RELAVQVSEELYKIGQTKRVRVLSIYGGQDISRQIRALKKHPHIIVGTPGRMLDHINRRT
LRLQDVHTVILDEADEMLNMGFIEDIEKILSNVPENHQTLLFSATMPTPIRRIAEKFMNE
PKVVKVKAKEVTMPNITQYYLEVQEKRKFDILTRLLDMQSPELAIIFGRTKRRVDELSEA
LNMRGYSAQGIHGDLTQSKRLSVLRQFKEGSIDVLVATDVAARGLDISGVTHVYNFDIPQ
DPESYVHRIGRTGRAGKMGAAMTFVTPRETGQLHNIERTTKRKMERMTPPTLDEAMEGQQ
RIAADKLTESVTQGNLSYYKQLAEELLEEHDSVSLVAAAIKLFTKEPNESPIQLTAEPPV
IAKGDKNKRGNGGGRSRSNSKNYSQQNRRGNSKRFGDKRRGGSNGSDNRNRNSSSNRKDS
RSKA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgaagaagcaacaccaattcaatcagaaactatcccattggcactagaaggt
cacgatttgatcggacaagcacaaacaggaacagggaaaacagcggcatttggtattcct
cttatcgaaaaagttgatgtaaacgtagatgcaattcaaggattaattattgctcctact
cgtgaacttgctgtacaggtatctgaagaactttacaaaattggtcaaacaaagcgtgta
cgcgtactatcaatttatggtggtcaagatatcagtcgtcaaattcgtgcattgaaaaag
caccctcatattatcgtaggaacaccaggacgtatgctagatcatattaatcgtcgtaca
cttcgtctacaagacgttcatacagttatattagatgaagcagatgaaatgttaaacatg
ggattcatcgaagacattgaaaaaatcttatcaaacgtacctgagaaccaccaaacactt
ttattctcagcaacaatgcctactccaattcgtcgcattgctgaaaaattcatgaacgaa
ccaaaagtggtaaaagtaaaagcaaaagaagtaacgatgccaaacattacgcagtactat
ttagaagtgcaagaaaagcgtaaatttgatatccttactcgtcttttagatatgcaatca
cctgaattagctatcatctttggtcgtacaaaacgccgtgttgatgagttatcagaagca
ttaaatatgcgtggttattctgctcaaggtatccatggtgacttgacgcaatcgaaacgt
ctatctgtactacgtcaatttaaagaaggttctattgatgtattagttgcgactgacgta
gctgcacgcggacttgatatctctggtgttactcatgtatacaactttgatatccctcaa
gatccagagagctatgtacaccgtatcggacgtacaggacgtgctggtaaaatgggtgct
gctatgacatttgtaacgccaagagaaactggacagttacacaacattgagcgtacaaca
aaacgtaaaatggagcgtatgacgcctccaacgcttgatgaagcaatggaaggtcaacag
cgtattgcggctgacaaattaacagaatctgtgacacaaggcaacttatcttactacaaa
cagttggcagaagagttacttgaagagcacgattcagtttcattagtggcagctgcaatt
aaattatttacaaaagagccaaacgaatcaccaattcaattaactgcggaaccaccggta
attgcaaaaggtgataaaaacaaacgtggaaatggcggaggtcgctcacgttctaattct
aaaaactactcacagcaaaatcgtcgtggaaactcaaagcgttttggtgacaagcgtcgc
ggtggaagcaacggcagtgataatagaaatcgcaatagcagcagtaatcgtaaagattct
cgcagcaaagcgtaa
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