Babesia microti: BMR1_01G02860
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Entry
BMR1_01G02860 CDS
T05554
Name
(RefSeq) DNA-directed RNA polymerase II subunit B
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bmic
Babesia microti
Pathway
bmic03020
RNA polymerase
bmic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMR1_01G02860
09124 Replication and repair
03420 Nucleotide excision repair
BMR1_01G02860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmic03021
]
BMR1_01G02860
03400 DNA repair and recombination proteins [BR:
bmic03400
]
BMR1_01G02860
Enzymes [BR:
bmic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMR1_01G02860
Transcription machinery [BR:
bmic03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
BMR1_01G02860
DNA repair and recombination proteins [BR:
bmic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
BMR1_01G02860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
24423644
NCBI-ProteinID:
XP_012647635
UniProt:
I7IFS2
LinkDB
All DBs
Position
I:1033561..1037500
Genome browser
AA seq
1202 aa
AA seq
DB search
MGLWIMVGYHTTQYQPWSEGANTSNNMYVKGFEKEPSITDDDSWTVISSFFKTHGLVHQQ
IESFDDFVTYRMQEIVDEYPPIEIRPQPQYRPEDEIEVNVIYKLKFGQLSLNRPSVDEKE
GVTKHIWPQEARLRNLTYSSQIYVDIDQEIYIYDEAKGQETLQDRTSYPRISLGKIPMML
KSMYCWTRNVSEDDLADIGECPYDQGGYFIVGGGERVLIAQERMANNFIYVFKKKQPSKF
SWVAEIRSQMEYSQGTSAFSIKMKAKQATANVIGNRFRSYDQLVATLPYIRTDIPVAILF
RALGCVADKDILQRIAYDFDDKQMLNLMKPTLEDALDFTTQDACLDFIGKRGPTVGAPRD
KRIQYAKDLLRKEVLPHVGTELGVESKKCYFIGYMVHRLLLAKLGRINQDDRDHFGKKRL
DMAGPLMASSFGTLFRKMAKDAKRILQHQIDCGRTFDVAGAIRSASQITQGLQYQLLTGN
WGKDRDGKVVRTGVSQVLNRLTFASCLSHLRRLNTPLGREGKMAKPRQLHNTHWGMICPA
ETPEGQAVGLVKNLALMCSISVGGASSTICELLTELGMDSLDEVPPEVIKDRVKVFINGT
WIGCFDEADNLVNTLLHFRRRCDISHETSIIKEIVSKEVKIFTDAGRAMRPLLVVHDGNR
LALKRSHVEKIRDGSYINECSSENTSAWNWLVESGVVEYIDCEEEEMCMVSMFVQDLHSN
SNYCSTYTHCEIHPCMILGVCASIIPFPDQNQSPRNTYQSAMGKQAMGVYSSNFNLRMDT
LSHLLYYPQKPLVCTRAMEFLRFRELPAGINAIVAIMCYSGYNQEDSLIMNQSSIDRGLF
RSVFNRTYVSEEKQQGSVTIEKFERPNPQFVAGMKRGDYSKLDSDGLVEPGSRVLGDDVI
IGRISPTLPNQDVAPKRDCSLCLRRSENGVVHSVLLSVNSKGSRFCKVKVRSVRIPQIGD
KFASRHGQKGTIGITYRMEDMPFTCQGIVPDIIMNPHAVPSRMTIGHLVECLVGKVGAIG
GLEGDATPFSSLTVKEIASKLHELGYERHGNEALYNGYTGRLLKSKIFIGPTYYQRLKHM
VEDKIHARARGPVTMLTRQPTEGRSRDGGLRFGEMERDCMISHGAAKVLKERLFDQSDAY
RVHVCDMCGLIVIADLNRGSFECSACDNKTNISQVSIPYACKLLLQELMSMAIYPKLTLG
VA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggggctgtggattatggtaggttatcacactactcaataccaaccatggtctgaaggt
gctaacactagtaacaatatgtatgttaaggggtttgaaaaagaacctagcattactgat
gatgatagctggaccgttatcagttcgttcttcaagactcacggactggtacaccagcaa
atcgagagtttcgacgatttcgttacctatcgcatgcaagaaattgtcgatgagtatcca
ccaatcgagattagacctcagccgcaataccgccccgaggatgaaatagaagtcaatgtc
atatacaaactaaaatttggccaacttagcctaaaccgcccttcagtagatgaaaaggag
ggagttaccaaacacatttggccacaggaagcgaggcttagaaatttaacatactcctcc
caaatatatgtggatattgatcaagagatatacatatacgatgaggcaaaaggtcaagaa
acgttgcaagatagaactagctaccctcgtattagtttgggtaaaatacccatgatgcta
aaatcgatgtattgttggactaggaatgtcagtgaagatgatttggctgatattggagag
tgcccttatgatcaaggtggttacttcatcgtaggcggaggagaacgcgttttgatagca
caggagaggatggctaataattttatttatgtattcaagaagaagcagccgtccaaattt
agttgggtggctgaaattcgctcccaaatggagtattctcagggtacatctgcatttagt
atcaaaatgaaggctaaacaagctactgccaatgttattggtaataggttcaggtcatat
gatcagctggtggctactttgccatatatacgaacagatatacccgttgctatcctattc
cgtgccctgggctgcgtggctgataaagatattttgcagcgtattgcgtacgatttcgat
gataaacaaatgcttaatctgatgaagccaacgcttgaagatgcattggattttactact
caagatgcttgtttggatttcattggcaagaggggtcccaccgttggtgctcctagggat
aagcgtatccaatatgccaaggatctactacgtaaagaagtgctacctcatgtgggtact
gagttgggtgtggaaagtaagaagtgctacttcataggttatatggtacacagattgtta
cttgcaaagcttggccgtatcaaccaagatgacagggatcattttggcaagaaacggctt
gacatggcggggcctctcatggccagcagttttggaacattgtttcgtaagatggcaaaa
gatgctaaacgaatacttcaacaccaaattgattgtggtagaacattcgatgtggctggt
gcaattaggagcgcaagtcaaataacacaaggacttcaataccaattgctaacgggcaat
tggggcaaggatagggatgggaaggttgtgcgtacaggagtatcacaagtacttaatagg
cttacatttgcaagttgtctttcccatttgaggcgactgaatacccctttaggccgtgag
ggtaagatggccaagccacgtcaacttcataacactcattgggggatgatttgcccggct
gaaacaccagaaggccaggctgtgggtttagttaaaaacttggctttgatgtgtagtata
agcgtgggcggcgcttcctctacaatttgcgagcttctcactgaattgggcatggattcc
ttagacgaagtgccccctgaagttattaaggacagggtgaaggtcttcataaatggcacc
tggataggatgttttgatgaagcagataatcttgtaaatacgttgttgcatttcaggcgc
cgatgcgatatatcccatgaaaccagtatcattaaggagattgtctcgaaagaggttaaa
atttttacggatgctggcagagctatgcgccctttacttgttgttcatgatggaaatcgt
ttagctttgaagcgatcccatgtggaaaaaataagggatgggagttacataaatgagtgc
tctagcgaaaacacctctgcttggaattggctagtagagtcaggtgttgttgaatacatt
gattgtgaggaggaagaaatgtgtatggtttcgatgtttgtccaagatttgcatagtaac
agtaactattgtagtacatatacacattgcgagatccatccgtgtatgatactgggcgtt
tgtgcttcgattatcccctttccagatcaaaaccagagccctaggaacacatatcagagt
gcaatgggtaagcaagcgatgggggtttattcctcaaattttaacttgcgaatggatact
ttatcacacttactttactacccacaaaagccgttggtatgtaccagggctatggaattt
ttacgttttagggagttgccagctgggattaatgcaattgtggctatcatgtgctactct
ggatataaccaggaagattcactgataatgaaccaatcatcaatcgaccgaggactgttt
agatccgtattcaaccgcacctatgtcagtgaggaaaagcagcaaggcagcgtaacaatt
gaaaagtttgaacggccaaatccgcagtttgtcgcaggtatgaaacgcggtgactattcc
aaattggatagtgatggattggttgagccaggttctagagtgctgggtgatgatgtaatc
ataggcagaatatcacccaccctacctaaccaagatgttgctccgaaacgtgattgttcg
ttatgtctccgccgttctgaaaatggagtagtccacagcgtgttactgtcagtaaacagc
aagggtagtcggttttgcaaggtaaaagttaggtcagtacgtattcctcaaattggtgat
aaattcgctagtcgtcatgggcaaaagggtacaataggcatcacttaccgaatggaggat
atgccatttacttgccaaggcatagtcccagacataataatgaatccgcatgcagtacct
tctcgaatgacaattggtcacttggtagaatgccttgtaggtaaagtaggtgcaattggt
ggattggaaggagatgccactccttttagtagtctcacagttaaagagattgcatctaaa
ctgcacgaacttgggtatgagcgccatggcaatgaggccttgtacaacgggtacactggt
agattgctgaaatcaaagatcttcataggacctacctattaccaaaggcttaagcatatg
gttgaagacaagattcacgcaagggccagaggcccggtgaccatgcttactcgccaaccc
actgaaggtaggtccagagatggaggtcttagatttggtgaaatggagcgtgactgtatg
ataagccacggggctgccaaggtgctcaaggagaggctttttgaccagagtgacgcttat
agagtgcacgtgtgtgacatgtgcggattgattgttattgcagaccttaaccgagggtct
ttcgagtgtagtgcttgtgacaacaagacgaatatatcgcaggtgtcaattccttatgcg
tgcaagttgttactacaggagttgatgtcaatggcaatttatcccaaattgactttgggt
gtggcttag
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