Babesia microti: BMR1_02g01070
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Entry
BMR1_02g01070 CDS
T05554
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
bmic
Babesia microti
Pathway
bmic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMR1_02g01070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmic03000
]
BMR1_02g01070
03019 Messenger RNA biogenesis [BR:
bmic03019
]
BMR1_02g01070
04121 Ubiquitin system [BR:
bmic04121
]
BMR1_02g01070
Enzymes [BR:
bmic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
BMR1_02g01070
Transcription factors [BR:
bmic03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
BMR1_02g01070
Messenger RNA biogenesis [BR:
bmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BMR1_02g01070
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BMR1_02g01070
Ubiquitin system [BR:
bmic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
BMR1_02g01070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
zf-C3HC4_3
RRM_1
zf-UDP
zf-RING_2
Torus
Mistic
Nup35_RRM_2
zf-RING_5
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
24424002
NCBI-ProteinID:
XP_012647987
UniProt:
I7I8N0
LinkDB
All DBs
Position
II:complement(387570..388823)
Genome browser
AA seq
417 aa
AA seq
DB search
MSDTEDEQLCPLCMEGLDETDRSFSPCGCGYQVCLWCLHYLRTSMGDKCPACRRPYDESK
FQFTGQLPTLNATTSSSSNRNKKSKEDISRSNSTTSQSQLHSSQLQNGTASTASLDDLKN
MRVLQRNLVYVVGLPQRLAKKEVLKRPEYFGQYGKIQNVVVNRSQAYSTHWEGPSYSVYV
TYSKISEASAAIEGIDGSQVDNRILRASFGTTKYCVYFLKNVKCTNVDCFYLHQLGDEKD
TFSREAMIPARHQLHGLAHQKADISENNTIGTPNKIFGVINPQIKHNSTNVVCDNLVSNE
GDIFDLNGIDVSLDMLISFYNKGNEFLIVTDVTNDLLKSFKSKYQYSVTNGIEEDVNAVI
RGIGYKWSLKKIGNIHANNESTKKCSSKLDLDLDRLKVQCEQTRSQIVNHLHQLYQS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatacggaggacgaacaactgtgccctctctgtatggaaggactggatgaaaca
gatcgttcattctccccctgtggttgtggataccaagtttgtctctggtgtttacactac
cttcgaacgtcaatgggcgacaaatgccccgcctgtcgaagaccatacgatgaatcgaaa
tttcagttcaccgggcaattgcccacccttaacgctactacatcttccagctccaatcgc
aacaagaagtccaaggaggatatatcccgctccaattccaccacatcccaatcacaattg
cattcttcgcagcttcaaaatgggacagcatctacggcatccctggatgacctaaagaat
atgcgcgttttacagcgcaatctggtttatgttgtaggtttgcctcagcgattggccaag
aaggaggtgttgaagaggccagagtattttggccagtatgggaaaattcagaatgtggta
gtaaatcgcagccaagcctatagtacgcattgggaagggccatcatacagcgtgtacgta
acctacagtaaaataagcgaagcttccgctgcaatcgaaggaattgacggatcacaagtt
gacaatcgtatccttcgcgcctcttttggtacgacaaaatattgcgtttattttcttaaa
aacgtgaaatgcacgaacgtcgattgtttttatttacaccaattgggggatgaaaaggat
acattttcacgggaagcgatgataccagcgaggcaccaattgcacggtctggcacatcaa
aaggcggatatatcggaaaataatactattggcactcctaacaagatttttggcgttata
aatccacaaatcaaacacaacagcactaatgtcgtatgtgataatctcgtgtccaatgag
ggtgacatatttgacctaaatgggattgatgtgtcattagatatgctaatttccttctat
aataaaggcaatgagtttctgattgtcactgacgtcactaatgatttgttgaaaagcttt
aaatccaaatatcaatactctgtaactaatggtattgaagaagatgtaaatgctgtaata
agagggattgggtacaaatggagcctgaaaaagataggaaatattcatgccaataacgaa
tccaccaagaaatgtagctctaagttggatctagatttggatagactcaaagttcaatgc
gaacaaactagaagtcaaatagtgaaccatttacatcaattatatcagtcgtag
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