KEGG   Babesia microti: BMR1_02g04165
Entry
BMR1_02g04165     CDS       T05554                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bmic  Babesia microti
Pathway
bmic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bmic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BMR1_02g04165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bmic03041]
    BMR1_02g04165
Spliceosome [BR:bmic03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    BMR1_02g04165
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st PRP4 Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_IFT122_1st eIF2A WD40_MABP1-WDR62_1st Cytochrom_D1 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 24424611
NCBI-ProteinID: XP_012648588
UniProt: I7JAX0
LinkDB
Position
II:1454061..1455581
AA seq 506 aa
MTDLTIPISSKALKEFELRSRLSSVTIAVPTLDNSIRWILRSLKEPIHLFGEGKFERRER
TKSLILFKYDKYFKDGHMVEQVIELHPEAKVLHEIVQKFQIDMSSVYSKRLKAQEETKAK
KTLDPAQTKREYQAQLEKLKRKQSSKVFYTEPENPEDVKNLRLQIVKHSFESWRDLKLQL
GSYKQDVDIYEHEKRIGNYIDHLTNNVELIASQIGSDRPLTRAKFSPDGQSIITSSYSND
VRLYTKNTSQDADNCREDYIHTTGFSAGHTDRVLDIVWSPSGILSACADGSLSHTSISDF
DVYQTISVHESRINSVVLHPIKSFFITASSDETLCYIDLEKMQPIYVQEGHGYPVHSVNV
NRYGSLCASGDSKGAMLIFDLRTGRHIFQDQIHHQIVTGVSFHPINCHIFATSSADNTVK
IHDLRKMQAIKTLLAHLKVVSSLQFESDGRFLATSSFDGTVKLWDCVGYKCFKILETAGS
RVVDVTMNNEFILSASYDRIFRLYNL
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgacagatttaactattccaatttctagcaaggcactcaaagaatttgagctgcgtagc
cgcttatctagcgtcaccattgcagtccctacgttagataattccattcgatggatttta
cgttcactaaaggaacctattcacctttttggggaaggaaaatttgaacgtcgagaacga
actaaaagtttgatactttttaagtatgacaagtatttcaaagatgggcacatggtggaa
caagtcattgaattgcatccagaggccaaagttttgcatgaaatcgtgcaaaaatttcag
atagacatgtctagtgtctactccaagcgcttaaaagcacaagaggaaactaaggctaag
aagacattggaccctgcgcagaccaaaagggaataccaggcgcagcttgaaaagttgaag
aggaaacaatctagtaaagtgttttatacggagccagaaaatccagaagatgtaaaaaat
ttaagactacaaattgtgaagcattcatttgagtcctggagggatttgaaattacagttg
ggtagttataaacaggatgttgacatttatgagcatgagaagagaattggtaactacatt
gaccatttaactaacaacgtagagcttattgcatcgcaaattggtagtgataggccactt
actcgtgctaaattttcaccagatggacaaagtataattacctcatcatattccaatgat
gtacgcctttatactaaaaatacctcacaagacgccgataattgtagagaagattacatt
catactactggctttagtgccggccacacggatcgagtgctggatatagtttggtcacct
agtggcatcctttccgcttgtgccgacggttcattatcgcatacttcaatctcagatttt
gatgtctatcaaactatttccgtgcacgaatcacgaatcaactcagttgtgttgcatcct
attaaatcatttttcatcactgccagtagcgatgaaaccctttgttacatagatttagaa
aagatgcagccaatttacgtgcaggagggacatggctatccagtacattcagtcaacgtt
aacagatatggaagcttgtgtgcaagtggcgattcaaagggtgctatgttgatttttgac
cttaggactggaaggcatatttttcaggaccaaatacaccaccaaatagtcacgggcgtg
tcattccatcccatcaattgccatatatttgcaacttcatctgcagataacacagtgaag
attcacgacctgaggaagatgcaagcaattaagacattattggcacatctgaaagttgta
tcttcgctccagttcgagtctgatggtaggtttttagctacaagttcgtttgacggtacg
gtcaaattgtgggattgtgtaggttacaaatgctttaagatacttgaaactgcggggagt
agagttgtggacgtcacaatgaacaatgagttcattttaagtgcctcttacgatcgtatt
tttaggctttataatttgtga

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