KEGG   Babesia microti: BMR1_03g00515
Entry
BMR1_03g00515     CDS       T05554                                 
Name
(RefSeq) Cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
bmic  Babesia microti
Pathway
bmic03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bmic00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    BMR1_03g00515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmic03019]
    BMR1_03g00515
Messenger RNA biogenesis [BR:bmic03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     BMR1_03g00515
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_EIPR1 EIF3I Beta-prop_NOL10_N Beta-prop_EML Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_Aladin NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 24424738
NCBI-ProteinID: XP_021338430
UniProt: A0A1R4AB62
LinkDB
Position
III:<188009..>190230
AA seq 446 aa
MPVLNEKIPFYETLLRQLKDDNLSNTANSLAAELNVEANNLVKSDHLYSLYSKYGYNQSS
EGFNEPSKLNALLESIHGGNYGSDDSCIPDLSEKVLDKQIQQRSQLAQGSPKWLTVWITG
EFAMQSACLSSAISSDSRLLAVGGVGGLATVTPLVEETKRSKRKPSPEGGTTVVGHTGNV
TALSFHPHKPLLISGGEDNRILLHEISAFGVVQRVNIIKHIREVSIINSLCVHPCGDFVL
AGTSSSILRMYDLASGKCYTCANAWGQHEPGGINGVAVTIGGAMIATAGQDGVIKVWDAK
SLSPIHSFAQSHRGFGVQNVSFDASQNYILSSGLDGVTRLWDLRKQRQVISVGGRIPRPC
IANLAIFLQDQRMIGVASVYQGVPNSAAQFYSELQIHSLLDGSVTLNLSEAHSVYPVWSI
NTYCDELSLITCSDDGTTRTFRLLEA
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgcctgtgctaaatgagaagattcctttttatgaaacattacttagacagctgaaagat
gacaacctatcaaacacagccaatagtctggccgctgaactaaatgtagaggccaataat
ctggttaagagtgaccatttatattctctatactctaaatatggatacaaccaatcatcg
gaaggatttaatgagccttctaagctaaatgcattactagagagtatccacggcggcaat
tatgggagtgacgatagttgtatacctgatctcagtgagaaggtcttggataaacagata
caacagagatcccaattagcccagggatccccaaaatggctaactgtttggataactggc
gaatttgctatgcaatcagcatgtttatcctcggcaatttcaagtgattccaggcttttg
gccgtgggaggtgttggaggattggccacagttacacctttagtggaagagacaaaaagg
agtaagaggaaaccttctccagagggaggaaccacagttgttggacatacgggtaatgtc
actgccctttcattccacccacacaagccgttgctcatttccggcggagaggataatcgc
attttgttgcacgaaatatcagcctttggtgtggtgcaacgggtaaacataattaaacat
ataagggaagtatcaataataaattccctatgcgtccacccttgcggcgatttcgtgttg
gcagggaccagtagctccattttgaggatgtatgatttggcttctggaaaatgttataca
tgtgctaatgcttggggacaacatgagcctggaggaataaacggggtggcagtgacaata
ggcggcgccatgatagcaacagcggggcaggatggtgtaataaaggtttgggatgcaaag
tcactttcaccaatacattcatttgcccagtctcaccgcggatttggtgtacaaaatgta
tctttcgatgctagccaaaattacatactatcatcgggtctcgatggcgttactaggctt
tgggatttgagaaaacaaagacaggtgatatccgttggcggaaggataccaaggccttgc
attgccaatctggcaatatttcttcaggatcaaaggatgattggagtggcatctgtttac
caaggggtgccaaattcagcggctcaattctacagtgaactgcaaatacattcattatta
gatggtagtgtaacactgaatttaagcgaagctcatagtgtttatccagtttggagcatt
aatacttactgcgacgagctgagtttgatcacatgttctgatgatggcactacgcgaact
tttaggttattggaggcgtaa

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