Babesia microti: BMR1_03g01295
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Entry
BMR1_03g01295 CDS
T05554
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bmic
Babesia microti
Pathway
bmic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMR1_03g01295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmic03019
]
BMR1_03g01295
Messenger RNA biogenesis [BR:
bmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BMR1_03g01295
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BMR1_03g01295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
Not1
SOG2
Motif
Other DBs
NCBI-GeneID:
24424894
NCBI-ProteinID:
XP_012648869
UniProt:
A0A0K3AQF0
LinkDB
All DBs
Position
III:complement(456098..460549)
Genome browser
AA seq
1483 aa
AA seq
DB search
MESEVGKYLSRFYSGAITVQQMTDMMQAMGSSANDSKNYKIFEGILNVLLSECKFYPKYP
AEELRLTAELFGSLLDRKLFLHRIEQLAAALDFILEGLRQSVSTKLYQFGYIALMRFQGN
VMQYPSFATRLSTIPTNDIALESLQRSCIEFVRSLPEEERNLICLDQGPPGPRQQTTAPI
THGENDVQSPFQLINQIIKWEGTKEDRSGLELIGTSKLKGGMESFGAGEMERLMDKIAEH
PCITPPRAQIAERVFGAFNNICAANVSIKASEIAPLIEPQHLNWLSLYIVKCRASKEPNL
QDVFVRFVELLGIPKIFDLVLTITYACIKVCLQYTEELKLLASYRTLLKNLGLWLGKVTL
ARDVPIMSRHVDLKALTIEAYERGHLYCMLPFTIKTLEGVRESKIFKPPNPWTVALLSLL
IEIHDLPDLKTNLVFEIALLFNSIGVDIDSERGRLKRNSLESRSRSLDPADFVPQVAPQD
AANTANTANTANTANTANTANTANTANTANTANTANTANTANTANTANTANTANTANTAN
TANTANTANTANTANTANTANTANTANIANTVNTAHAAQNASLVNLIVHVMNRGLFTAHG
LAVGEVKPPIDTPILEYGGYADMFLKQLPKLVVISPTIALFEIQPHLKSIIPLAVDRAVR
KVLPGIERHCISIAKVASIHLVSKDFSAHDGELARRAARLSASSLAGSLALVTCKEPLRL
ACHESLRLALQQHRTKDSNDQILIEQIVQVLTNDNLMVISQIVTKAVVERASKLFEDFFP
SEPQPFGEVPIKLPPYLQLSNPPSPAQLNVYRHLVSEAEAEGADAAPEQQEPSLRAQDAV
QAGIRARGEGDAAQAAAIGGPLYELSFDSELVAHLLLLYYRAEDEVMARQGGEAGPQAQD
VVRLIVDGLPQGLIASLAEGLGDSSAPAKQDICEGLLGLFCSSFWGFQPRAKLATQAEPG
GPPRRTGGALDVSQIAAGQQLFQRMIRRWTALCRDPMINTQGTRLGYVWTKFDEKMRLSS
AMERLGRPEFYRSLLPCVPESDFDCLIKLVQGIDLLEKLKVPANLRALVDAACDDALNGG
LEGGQQRTCRLFLQLIDGYLATPTSLGLTAASLIAQALLRLFPLSSSEAPSTPFGGWYKV
ASHAHLTTKLLSAPAQWPLLFQLLKRIIIHDSAFNGLAAEDSGSQVAMILCDISIGCPEF
IVKYHMPLLSHLPQSRRDLWNLVTSAAPRNSVIPDPRACDEVELLPGSSVDVDRPIFSTL
LLHGPLLAAIEQFLRKVAAPIDDIQEFDLLVTIRNSFYSHLHRLHLRHRPDLLAGSDFSE
DCLDYTLTLQLLFSLLSLQYERSSDESLQAQLNSLVLFLLMSTEGNVRKWLIKALTAFLR
YPNRQTLHFSKLYQWLVLEGRDGQLGFELVHEVYTALSCPKPQAWGVTLVLLEVLKMDVR
SMGAFANRQEFLEQLFALVHRLFGGDVPGAHCDPAWNTWNGPH
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaagtgggcaagtacctctctcgtttttacagcggggccataaccgtccag
caaatgacagacatgatgcaagctatgggaagtagtgccaatgactccaaaaactacaag
atatttgagggtattcttaatgtgttgctgtcggagtgtaaattttacccaaagtaccct
gcagaagaactaaggctaacggccgaactttttgggtccctcttagacaggaagcttttc
ctccaccgcatagagcagctggcagctgctctggattttatcctcgagggactgcggcaa
agcgtaagcactaagctatatcaatttgggtatattgcactgatgcgtttccagggcaac
gtaatgcaatacccttcctttgcgactagattatctacgattcctaccaacgatatagca
ctggaaagcctgcagcgttcatgcattgaatttgttaggtctctgcccgaggaggagagg
aatcttatttgtctggaccagggcccacccgggcctagacaacaaactacagcgcccata
acccatggggaaaatgacgtgcaaagccccttccagctgataaaccagataataaaatgg
gaaggcactaaggaggaccgttctggccttgaactgatcggcaccagcaagctaaagggg
ggaatggaatcttttggcgctggagaaatggagcgactgatggataagatcgctgagcac
ccctgcataaccccgccccgggcccagatagcagagagagttttcggggcgttcaacaac
atatgcgcggcaaatgtatcaatcaaggcctctgagatagccccgcttattgaaccacag
catctgaattggctgtccctatacatcgttaagtgccgggcgagcaaagagcccaatctg
caagacgtattcgtcagatttgtcgagctactggggatacccaaaatctttgacctagtg
ctgaccatcacctacgcatgcattaaggtctgcctccagtacaccgaagagctgaaactc
ttggcttcataccgaacgcttttgaagaatttagggctatggctggggaaggtgactctg
gcaagagacgtgcccataatgtcaaggcatgtggatctaaaagcactgacaattgaagcc
tacgaacggggccacctctattgcatgctaccattcacgatcaagacgctcgagggggtg
cgggagagcaagattttcaaacccccaaacccgtggactgtggcactgctatcgcttttg
attgagatccatgacctgccggaccttaagacaaacctcgtctttgagatagcgctgctt
tttaattcgattggagtggacatagacagcgagcgggggaggctgaagcggaatagcctc
gagtccagaagtaggtcgctggacccagcagattttgtcccccaggtggcaccgcaggac
gcagcaaatacagcaaacacagcaaatacagcaaatacagcaaacacagcaaatacagca
aatacagcaaatacagcaaacacagcaaatacagcaaatacagcaaacacagcaaataca
gcaaatacagcaaacacagcaaatacagcaaatacagcaaacacagcaaacacagcaaat
acagcaaatacagcaaacacagcaaacacagcaaatacagcaaacacagcaaacacagca
aatacagcaaatacagcaaacatagcaaacacagtaaacacagcgcatgcggcacagaat
gcctcgctcgtaaacctcatcgtgcatgtgatgaacaggggcctcttcacggcccatgga
ctggccgtcggagaggtaaaaccacccatagacactcccatactcgaatacgggggctac
gcagacatgtttctaaaacaattacccaaactagtggtcatctcgcccaccatagccctg
ttcgaaatacagccgcacctcaagtccatcataccgctggccgtggaccgagcggtacgt
aaagtgctgcccggaatagaacgccactgcatatccattgccaaggtagcctccatccat
ctggtctcaaaggacttttctgcccacgacggcgaactggcccgccgggccgcccgtcta
tcggcctcgtccctggctggctccctggcactggtcacctgcaaggagccgctgaggctg
gcctgccatgagtcccttcgactggcactgcagcagcacaggacaaaggacagcaatgac
cagattttgatcgaacagatagtccaggttttgaccaacgacaacctaatggtcatcagc
caaatagtgacaaaggcggtcgtcgagcgggcttcaaagctgtttgaagattttttcccc
tccgaaccccagccttttggggaggtaccaatcaagcttcctccctacctacagctgtcc
aaccccccctccccggcccagctcaacgtctacagacacctcgtatctgaggccgaggcc
gaaggggcggacgcggcgccagagcagcaggagccatctctccgggcccaggacgcggtg
caggccggtattcgggccaggggggagggggacgcggcgcaggccgccgccattggcggc
cctctctacgagctgtcgttcgacagcgagctggtggcacaccttttactgctgtactac
agggccgaggacgaggtaatggcccggcagggcggcgaagcggggccgcaagcgcaggac
gtggtccgactgattgtcgacgggctgccgcaggggctcatcgcgtctctggcggagggg
ctcggggattcttcagccccggcgaagcaggacatttgcgaggggctgttgggtcttttt
tgcagctcgttttggggcttccagccccgcgccaagctggcgacccaggccgagccgggc
gggcccccgcggcgcaccggcggcgccttggacgtaagccagatagccgcgggccagcag
ctgttccagcgcatgataaggcgctggacagccctgtgccgtgatcccatgataaacacc
caaggcacccgcctggggtacgtgtggaccaagtttgacgagaagatgaggctatcatcc
gcgatggagcggctgggcaggcccgagttttacaggagcctcttgccttgcgtccccgag
tcggactttgactgtctgatcaagctggtgcaggggatcgacctgttagagaagctcaag
gtcccggccaacctgcgggcgctggtggacgctgcctgcgacgacgccttgaatgggggt
ttggagggtgggcagcagcggacctgcagactgtttttacagcttatagacgggtatctc
gccacgccaacatctttgggcctcaccgccgcctctttgattgcccaggcgcttttgcgc
ctctttcccctgtcctcttcggaggccccctcgaccccctttggcgggtggtacaaagtc
gcctcccacgcccacctcacgaccaagcttctctctgcccccgcgcaatggccgcttctt
ttccagctcctcaagcgcattattatacacgactctgccttcaacggcctggccgcggag
gactccggctcccaggtggccatgattctttgcgacatttccatcggctgcccagagttt
atcgtaaagtaccacatgccgttgctatcgcacctgccccagtcccgcagggacctttgg
aacctggtcacctctgcggcccccaggaactcggtcatcccggatccgcgcgcctgtgac
gaggtcgagctgttgccggggtcgtctgtggatgtagatcgtccgatatttagcacgctt
cttctgcacgggccgctgctggcggccattgaacagttcttaaggaaggttgccgcgccg
atcgacgacattcaggagtttgaccttctcgttacgattcgcaattctttctattcgcac
ctgcatcgcctccacctgaggcacagacccgatctgctggcgggctctgattttagcgag
gactgcctcgactatacgttaaccctacagctgctcttctcgctcttgtccctgcagtat
gagcggtctagcgacgagtccctgcaggcgcagctcaattccctcgtgttgttcctcctc
atgtcgaccgaggggaacgtgcgcaaatggctgatcaaggcgctgaccgcttttctgcgg
tatcccaacaggcagacgctgcacttttctaagctctatcagtggctggtgctggagggc
agggacggccagctgggctttgagctcgtgcacgaggtgtacactgcgctgagctgccca
aagccgcaggcctggggagttacgctcgtcctgctggaggtcctcaagatggatgttagg
tcaatgggcgccttcgccaacaggcaggagttcttggagcagctctttgccctagtgcat
aggctttttggcggcgacgtgccgggtgcccactgcgaccccgcctggaacacttggaat
ggccctcattag
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integrated database retrieval system
