KEGG   Babesia microti: BMR1_03g01477
Entry
BMR1_03g01477     CDS       T05554                                 
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
  KO
K15542  polyadenylation factor subunit 2
Organism
bmic  Babesia microti
Pathway
bmic03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bmic00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    BMR1_03g01477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmic03019]
    BMR1_03g01477
Messenger RNA biogenesis [BR:bmic03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     BMR1_03g01477
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_IFT140_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd DSE1_N ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_Aladin Beta-prop_EML Beta-prop_EIPR1 EIF3I Beta-prop_WDR19_1st Beta-prop_NOL10_N WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd CFAP251_N Beta-prop_WDR36-Utp21_2nd WDR54 Beta-prop_HPS5 NBCH_WD40 Beta-prop_WDR75_1st ASA1 DNAI3_WD Tricorn_2nd Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 24424931
NCBI-ProteinID: XP_012648906
UniProt: A0A1R4ABH5
LinkDB
Position
III
AA seq 478 aa
MNEDIYVGPPVQFRTGIDRLTVDGYASLLPLLTDAKYAKRNTRVYYRDHPFYYHQLLPVQ
YFSGIPNDYCAIPAHLSHAASNRNKFPNVVLKWFPNGKSLLAGTQGGKLIVWNGLTFHFE
DIKRFPVSSGSVTALEWAPTGDLLVAGDEYGKVALLSQALSLLDTKIFEGFSKTVYDLSL
SPNASKLAGCADSFAPIIWDVSKRAIERRLTGEHIDASSATCLQWHTTMALVAAGTRTNC
IHLWDPRADGSAATIHAHKSAVNKIQFNPKAHTNISNALLSAGRDGMVKVWDLRLLTTPT
QVHKLPQVQDEPTHVKYPQPCFPSSIAWHPIQTNIFSVADNKSRIMYYTTDLHQEMKLLH
INLPQLPDRDVCTLSMAWHPLGHLLASCSDDKFVRFWCRSPPGGIRGHCLNVKMLQDIHY
KQQEWQKSAAVIAVEAAGGSSPSCPFSVSRFKSHSGAVNGWRIGDLASMENFRAKHQD
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgaatgaagatatttatgttggtccaccggtccaatttcgtaccggcattgatcgcttg
accgttgatggctacgccagtctattacccctactaactgatgccaaatatgccaagagg
aatactagggtctattatcgtgaccacccattttattatcaccaattactacccgtacaa
tacttttctggcatcccaaacgactactgtgctataccagcgcatctttcacatgctgca
tcaaaccgaaataaatttcccaacgttgtactcaagtggttccctaacggcaaatccctt
ctagctggtactcaaggaggcaagctcatcgtctggaatggactaaccttccactttgaa
gacataaaaagattccccgtaagtagtggcagtgtcactgctctggaatgggctcccact
ggtgacctattagtagcaggtgatgaatatggcaaggttgccctgctatctcaagcttta
agtttgctagataccaagatttttgaggggttctccaagactgtttatgacctatcgcta
tcaccgaatgccagtaaacttgccggttgcgcagactcatttgctccaatcatttgggat
gtcagcaaacgtgcaatagaacgccgtctcactggtgagcatatcgacgcttccagtgcc
acttgccttcaatggcacacaactatggccttagtagctgctggaactaggacaaactgt
attcatttatgggatccaagggctgatggtagtgctgccacaattcacgcacacaaatcg
gcagtcaacaaaattcaattcaacccaaaggcgcacacaaacataagcaacgctttacta
agtgctgggagggatggaatggtcaaagtatgggacctgcgtctattaactacacctaca
caagtgcacaagctccctcaggtgcaagatgagcctacacatgtcaaatacccccagcca
tgcttccccagcagcattgcatggcatcccatccaaaccaatatatttagtgttgcagat
aacaagtctcgcataatgtactacactacggatttgcatcaggagatgaagttgttgcat
atcaacctacctcaactaccagaccgtgacgtatgtactctgtctatggcttggcaccca
ttgggtcacttactggcctcttgtagcgatgacaagtttgtgagattttggtgtagatct
cctcctggaggcattaggggccactgcttgaacgttaagatgctgcaagacatacattac
aagcagcaggagtggcaaaagagcgccgcggtaatagcggtagaagctgcaggtggctct
tctccttcttgtcccttttcagtatcccgatttaaatcgcatagcggggctgttaacggg
tggaggattggtgacttggccagtatggaaaatttcagagccaagcatcaagattag

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