Babesia microti: BMR1_03g02380
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Entry
BMR1_03g02380 CDS
T05554
Name
(RefSeq) pre-mRNA-splicing factor RBM22/SLT11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
bmic
Babesia microti
Pathway
bmic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BMR1_03g02380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmic03041
]
BMR1_03g02380
Spliceosome [BR:
bmic03041
]
Complex B
Other components
Prp19-related factors
BMR1_03g02380
Complex C
BMR1_03g02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
zf_CCCH_4
RRM_1
zf-CCCH
Torus
zf-CCCH_4
RRM_PARP14_3
DUF4428
zf-CCCH_2
RRM_YTH1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
24425118
NCBI-ProteinID:
XP_012649087
UniProt:
A0A0K3AU21
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All DBs
Position
III:complement(<834307..>835349)
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AA seq
339 aa
AA seq
DB search
MEPSGFGVISDAHRRGNEISEFPMLCETCLGDNPFIRMMKETCGKECKICARPFTLFRWK
PGAKARYKQTIICQSCAKIKNVCQTCLFDLQYGLPVQVRDQVLNHDKLDVPTSKVNSDYF
ANQLEKNSQQNSTSLIKAEARSSLNKLAKLAPYYRRNMPRVCTFWLKGECNRGAECPYAH
EKYEHDPTIANQNIRDRYVGDKDVLADKILRQHEINKALQAPSDKTITTLCVSGLAGKVK
DPESSKLIVGEDNLQTHFSKYGKVASIKLIPKLACAFITFDRRSDAEQAAFHSRKGLELE
SIPLNITWARSQFENEDYCPTGKGPNVYPSMLPQYAEKF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgagtggattcggtgtcatttctgatgcacataggagaggaaatgaaatttca
gagtttcctatgctttgtgaaacatgtttgggagataatcctttcattaggatgatgaag
gagacttgtgggaaggaatgtaaaatatgtgctaggccttttactttatttagatggaaa
ccaggggccaaagctaggtataaacaaaccataatctgccaatcatgtgctaaaattaaa
aatgtttgccagacatgcttatttgatttgcagtatggtctaccagtacaagtccgtgat
caagtattgaatcatgataaacttgatgttccaactagtaaggttaatagcgattatttt
gcaaaccaacttgaaaaaaattcacaacaaaattccacaagtttaatcaaagcggaagcc
agaagttcattgaataaattggccaaattggcaccttattacaggaggaatatgcctaga
gtttgtacgttttggcttaagggggaatgtaatagaggtgcagaatgcccttatgctcat
gaaaaatatgagcatgatcctacgatagcaaatcaaaatattcgtgatcgttatgttggt
gataaggatgtccttgcggataaaatcttacgtcagcacgaaataaataaagcactacaa
gctccatctgataaaactatcacaactttatgtgtttctgggttggctggaaaggtaaag
gatcctgaatcttctaaattgattgttggcgaagacaaccttcaaacccatttttcaaaa
tatggaaaggttgcttcgataaaactaattccaaaattggcatgtgcgtttattacattt
gatcggagaagtgatgctgaacaggcagcgtttcattctagaaaggggttggaattggaa
agtattcctctgaatattacttgggcaagatcgcaatttgaaaatgaagattattgtccc
actggaaaggggcccaatgtttacccttctatgcttcctcagtacgctgagaagttttaa
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