Babesia microti: BMR1_03g04810
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Entry
BMR1_03g04810 CDS
T05554
Name
(RefSeq) ATP-dependent RNA helicase UAP56/SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bmic
Babesia microti
Pathway
bmic03013
Nucleocytoplasmic transport
bmic03015
mRNA surveillance pathway
bmic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BMR1_03g04810
09122 Translation
03013 Nucleocytoplasmic transport
BMR1_03g04810
03015 mRNA surveillance pathway
BMR1_03g04810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmic03019
]
BMR1_03g04810
03041 Spliceosome [BR:
bmic03041
]
BMR1_03g04810
Enzymes [BR:
bmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMR1_03g04810
Messenger RNA biogenesis [BR:
bmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BMR1_03g04810
Spliceosome [BR:
bmic03041
]
Complex C
Other components
EJC/TREX
BMR1_03g04810
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
BMR1_03g04810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
24425608
NCBI-ProteinID:
XP_012649570
UniProt:
A0A0K3APG6
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All DBs
Position
III:1735631..1737374
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AA seq
434 aa
AA seq
DB search
MADMNEELVDYEEEQGTLPTRQVIKSATGGDGMIGRGSYVAIHASGFRDFFLKPELLRAI
GDAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSVLQQINAPDQPTDSTSGV
VCLGISHTRELAYQIKNEFDRFGKYIKNVKCEVVYGGIPIQKNISMLKDPSTCPHVLVGT
PGRILALIKGRYLNTDKIQHFVLDECDKCLEKLDMRKDVQNIFISTPKKKQVMFFSATMT
PEIKAVCKKFMQSPVEVFVDNESKLTLHGLLQYYVKLQESDKNRKLNDLLDALEFNQVII
FVKSVSRAQILDNLLTECNFPSIAIHAGLEQAERITRYNQFKNFDKRIMVATDLFGRGID
IERVNIVINYDMPDSTDSYLHRVGRAGRFGTKGLAITFVSTDEDLASLQSVQTRFEVTIS
EMPSSIDSSLYLNQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatgaacgaggaattggttgattatgaagaggagcaggggacgttgcccacg
agacaagtcattaagtcggccaccggcggagatggcatgattggccgtggaagttacgtt
gcaattcatgcctctggttttagggatttcttcctcaaaccggaactcctgagggctatc
ggagatgccggctttgagcacccttcggaagtccaacatgaaacaattcctcatgcgatc
actggcgtggatattttatgccaagcgaaatcaggaatgggtaaaacagcagtgtttgtg
ttatctgtattacaacaaatcaacgcaccggatcagcccacagattccaccagtggtgtt
gtctgtttgggcatatctcacacccgagagcttgcctatcaaatcaaaaatgaatttgat
cgttttggaaaatatatcaaaaatgtcaaatgcgaagttgtttatgggggcattcctatt
caaaaaaatatatcaatgcttaaagatccatcaacttgtccacacgtactggtaggaact
ccagggcgtattctagctctgataaaagggagatacctaaatacagacaagatccagcat
tttgtgttagacgagtgcgataagtgtctagaaaagttggacatgaggaaagatgttcaa
aatatattcatttccacacctaagaagaaacaagtcatgttcttttctgccactatgacg
cctgagatcaaagccgtttgcaagaaatttatgcaatcacctgtggaagtatttgttgat
aacgagtcaaaacttacgctacacggactgttacagtactatgtgaagttacaggaatcg
gataaaaataggaaattgaacgatctattggatgcactagaatttaaccaagttattatc
tttgtgaaatctgtttccagggcgcaaatattagataacttgcttacagagtgtaacttc
ccgagtatcgccatacatgcgggattggagcaggccgaaagaattacccgatacaatcaa
ttcaagaattttgacaagcgcattatggtagcaactgatttatttggcaggggcatagat
atcgagagggttaatatagtaatcaactacgatatgccagattccactgattcctacctg
caccgagttggccgcgctggtagatttggcactaaaggcttagctataacttttgtgtcc
acagatgaagacttggcatcgttacagagtgtacagacgagatttgaggttacaatttca
gaaatgccatcatcaatagactcttcgttatacctaaaccagtaa
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