KEGG   Babesia microti: BmR1_04g07070
Entry
BmR1_04g07070     CDS       T05554                                 
Name
(RefSeq) histone deacetylase 1/2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bmic  Babesia microti
Pathway
bmic03082  ATP-dependent chromatin remodeling
bmic03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bmic00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    BmR1_04g07070
   03083 Polycomb repressive complex
    BmR1_04g07070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bmic03036]
    BmR1_04g07070
Enzymes [BR:bmic01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     BmR1_04g07070
Chromosome and associated proteins [BR:bmic03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     BmR1_04g07070
   HDAC complexes
    Sin3A-HDAC complex
     BmR1_04g07070
    BRAF-HDAC complex
     BmR1_04g07070
    REST complex
     BmR1_04g07070
    SHIP complex
     BmR1_04g07070
    MiDAC complex
     BmR1_04g07070
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     BmR1_04g07070
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    BmR1_04g07070
  Chromatin remodeling factors
   NuRD complex
    BmR1_04g07070
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 24426061
NCBI-ProteinID: XP_012650017
UniProt: I7I9T7
LinkDB
Position
IV:858786..860141
AA seq 451 aa
MKRVAYFHDPDIGSYYYGPGHPMKPQRIRMAHSLVLSYDLYRHMEVFRPHRAVEPELLSF
HDSDYICFLSSVSPENYLDFSYQSKRFNVGEATDCPVFDGLFDFQQSCSGASIDGAHKLN
HQQADICINWSGGLHHAKRSEASGFCYINDIVLGILELLKYYTRVMYIDIDIHHGDGVEE
AFYVTHRVMTVSFHKFGNFFPGTGDITDIGMSTGKYYSVNVPLNDGIDDESFVDLFKVII
GKCVESYRPGAIVLQCGADSLTGDRLGKFNLTIKGHAACVAFVKELNIPLLVLGGGGYTI
RNVARCWAYETGVVLDKHNEMSNQITLNDYYDYYAPDYQLHLTPQNIPNYNKPEHLEKLK
IRIMENLRHVEHAPGVQFAHVPPDFINCQDDPDEEEQLKVFLEGGGLASVEKMNAEKRLG
APPIYINHKLRRRDYEHDPYDLPDRDQSIPI
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaacgcgttgcttacttccatgacccagatatcggttcctattattatgggcctggg
catccaatgaaaccacaacgcatcagaatggctcattcattggtgctctcttatgatctt
taccgccacatggaagtttttcgacctcatcgcgcagttgaaccggagcttctttctttc
cacgatagcgattacatatgctttctttcatcagtaagcccggaaaactatcttgacttt
tcctaccaatcaaagcgattcaatgtgggtgaggctactgattgtccagtattcgatggg
ctatttgatttccaacagtcttgtagcggtgctagtattgatggagcacacaaactaaac
catcaacaggcagacatttgtatcaattggagcggaggactgcatcatgcaaaacgaagt
gaggcttcgggtttttgttacataaacgacatagtgcttgggatactagaattgcttaaa
tattacactagagtgatgtatatagatattgatatacaccatggcgatggagtggaggaa
gctttttacgtaacacaccgcgtgatgacggtaagttttcacaaatttggtaactttttt
cccggtacaggagatataaccgatattggcatgtcaactggcaaatattacagtgtaaat
gtgccactaaatgacgggatagacgatgaatcctttgttgatctctttaaagtgataatt
gggaagtgtgtggaatcgtatcgtccaggggcaatagtgcttcaatgtggtgcagattca
ctcacgggagataggctgggaaagtttaatttgacaattaagggccacgctgcttgcgtg
gcctttgtcaaggaactaaatatccccttactagttttgggcggtggtggttatactatt
aggaacgttgctcgttgttgggcctacgaaacgggtgtggttcttgataagcacaacgaa
atgagcaatcagatcacgcttaacgattactatgattactatgccccagattatcaacta
catcttacaccgcaaaatatacccaactacaacaaaccggaacacttggagaagttgaag
attagaattatggagaatttgcgccatgttgaacacgcacctggagtgcaatttgctcat
gtaccgccggatttcattaactgccaagatgacccggatgaggaggaacagttgaaggtc
tttttggaaggcggtggacttgcatcggttgaaaagatgaacgcggaaaaacgattggga
gccccgccaatttacatcaaccacaagctcaggaggagggattatgagcatgatccatat
gacttacctgatcgggaccaatctataccgatttaa

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