Babesia microti: BmR1_04g08675
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Entry
BmR1_04g08675 CDS
T05554
Name
(RefSeq) RNA recognition motif. (a.k.a. RRM RBD or RNP domain)
KO
K12890
serine/arginine-rich splicing factor 1
Organism
bmic
Babesia microti
Pathway
bmic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BmR1_04g08675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmic03041
]
BmR1_04g08675
Spliceosome [BR:
bmic03041
]
Common components
Common spliceosomal components
SR proteins
BmR1_04g08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
RRM_PARP14_3
RRM_occluded
RRM_7
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
24426365
NCBI-ProteinID:
XP_012650320
UniProt:
I7IHJ3
LinkDB
All DBs
Position
IV:1396119..1396848
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AA seq
227 aa
AA seq
DB search
MGSPDENGRVYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSSFAFVEFEDPRDAK
DAIKEKDGYEFKGSRLRVEVPFSDRGYSRRRPTPRRGHYTVEVLGLPPSGSWQDLKDHMR
DAGECGHADVFRGGVGEVSFFSRRDMDAAIEMFDGSTFRSHEGEKAKITVREKRSRYRNS
SRSGSRPRRRYRSRTRSRSRSYRSRTRSFSRSRSHSRTRSRSYSRRR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcccggatgaaaacggaagggtatatgtaggtaatttaccttctgaatgtgat
caaagagaaatcgaagaggaatttgaaaagtttggcaagataaaacgatgcgatgtaaag
aggggggcaaatggttcttcttttgccttcgttgaatttgaagatcctagagatgccaaa
gatgcaattaaagagaaagacggatatgaatttaagggttcaaggctgagagttgaagtt
cctttctcagatagaggttattctcgccgtcgtcccacccccagaagagggcattatact
gtagaagtattgggattgcctccatctggtagttggcaagatttgaaggatcatatgagg
gatgctggcgaatgtggtcatgcagatgtttttagaggcggagttggtgaagtctcattc
ttttccagacgtgacatggatgctgctattgaaatgtttgatggatcgactttcaggtca
catgaaggagagaaagctaaaattactgtccgtgaaaagcgttcaaggtatcgaaattcc
agtagaagtggttctagaccacggagaaggtatcgctctaggactcgttctagatcgaga
agttacagatcaaggacaagatccttctccagaagtagaagtcattctagaactaggagt
cgttcttattctagaagaagatga
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