Babesia microti: BmR1_04g09060
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Entry
BmR1_04g09060 CDS
T05554
Name
(RefSeq) transcription initiation factor TFIIH subunit H4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bmic
Babesia microti
Pathway
bmic03022
Basal transcription factors
bmic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BmR1_04g09060
09124 Replication and repair
03420 Nucleotide excision repair
BmR1_04g09060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmic03021
]
BmR1_04g09060
03400 DNA repair and recombination proteins [BR:
bmic03400
]
BmR1_04g09060
Transcription machinery [BR:
bmic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BmR1_04g09060
DNA repair and recombination proteins [BR:
bmic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BmR1_04g09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
BTB_2
Motif
Other DBs
NCBI-GeneID:
24426441
NCBI-ProteinID:
XP_012650395
UniProt:
I7IHK8
LinkDB
All DBs
Position
IV:complement(<1517900..>1520135)
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AA seq
612 aa
AA seq
DB search
MSRVLDVYDYLRHLGLNVWIKLFRGNATFLSIFRSFTELEQLVVFRLLFLAQPVSERALR
LWFKPGNATELNSTLFRLVSCYALTVTPAQSPTTAVGGKSTMLNQYKLQDDFREGLLRCV
LGKDYKQTSDEITPLNVDDLNCDLYKNLSKSMLFDYSRHRWELILRYIVSIEFRKKVAKS
AQRISQINPDSQGKSAIIAEDVITTLKRHKLVFKPSNSTVSQTFQTVGMSRQALSWLLRD
TRSQLNSLILEFIYLYDMGKLTNVKLADDMDSTSTADEYPLQNSTAGAKDTLNLEEAEKN
VTDIIYFILTLSQLTIGQPISSKGLTKAQKRFLRFAVDLGILWQPKLDCDESSIDLDSGI
HNIRRDKIYFAAPHALLFRSHMSEPLSLVSAITTADFSSRKLEIPNHYFSPYLLNETETA
VPRMRHNLESGIIVQSNFKVYVYTASPLQINVLAHLCELQSRTPNLVIGVLTRASAHAAF
RAGITAKQICQFLETHSHPILLQNVREGGSYLPNNVVTQLNMWEAERNRISLEQCVLIKK
WEQEYLPELFQHTVRWAESKNYLLHYTTWPDNPSSKEFQDWLIREKYLACKGDAQDEVIE
FIRSLKELKHKH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagtagggttttagatgtatacgactacctacggcatttgggattgaatgtatggata
aaactatttcgtggaaatgccaccttcctctcgatcttccgttccttcaccgaactagaa
cagctagtggtcttcagattgttattcctcgcgcaacctgtatctgaaagagcattgaga
ttgtggttcaaaccaggaaatgctaccgaactaaatagcactttatttagacttgtttct
tgctatgccttaacggtcactccagcacaatcaccaaccactgcagttggtgggaaatct
accatgctaaaccaatataaacttcaggatgattttagagaagggttattacgttgcgta
ctgggaaaagattataaacagacgagcgacgagatcacaccgcttaacgtcgatgatcta
aattgcgatttgtataaaaatttgagtaaatcaatgctgttcgattactctagacataga
tgggaattgattcttagatacatagtgtccattgagtttaggaagaaggttgccaaatca
gcccaaaggatcagtcaaatcaatcctgactcacaaggcaaatccgccattatcgcagaa
gatgttatcacaacactcaagcgccacaaattggtattcaaacccagcaattccactgta
tctcaaacatttcaaacagtaggtatgtctcgccaagccctttcatggctactgagagac
acccgttcacagctcaattctctgatattggaatttatatatctttatgacatgggcaag
ctcacaaatgttaaattggcagatgatatggattccacatctacagctgatgaatatccg
ctgcaaaattcaactgctggtgctaaagatacactaaatttggaggaggcagaaaagaac
gtcacagacattatatatttcattctcacgctgtcccaattaacaatcggccaaccaata
agctctaaagggttgactaaggcacagaaaaggtttttacgctttgcagtggaccttgga
attttatggcaaccgaaattggattgcgatgagtcgtcgattgatctggatagtgggatc
cataatattaggcgcgataagatatattttgcagcacctcatgcactattgtttaggagc
catatgtctgagccactatcactagtttcagctattacaactgcggatttttcctccaga
aaattagaaatccccaatcactatttctctccctatctattgaatgaaactgaaacagca
gttccccggatgaggcacaatcttgagtctggtataattgtacaaagtaatttcaaagta
tacgtttacactgcatctccacttcaaataaatgtactagcacatctttgtgagttacaa
tctaggacaccgaatctggttattggcgtcctaacacgtgctagtgcccacgcagctttt
cgcgctggcataactgccaagcaaatttgtcaatttctggagacacattcgcatcctatt
ttactacaaaatgttagggaggggggatcttatttgcccaacaatgtagtgacgcagctt
aacatgtgggaggcggaacggaacagaatatcactagaacagtgtgtactaattaagaaa
tgggagcaagaatatctccctgagttatttcaacacacagtcaggtgggctgagagtaaa
aattatctcctccactataccacttggcctgataatccaagttccaaagagtttcaagat
tggcttattagagaaaagtacctggcctgcaaaggtgatgcccaggacgaagtgattgaa
tttatcaggtccctcaaagaattgaaacataagcactaa
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