Babesia microti: BmR1_04g09080
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Entry
BmR1_04g09080 CDS
T05554
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bmic
Babesia microti
Pathway
bmic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BmR1_04g09080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmic03019
]
BmR1_04g09080
Enzymes [BR:
bmic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
BmR1_04g09080
Messenger RNA biogenesis [BR:
bmic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
BmR1_04g09080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
24426445
NCBI-ProteinID:
XP_012650399
UniProt:
I7ISZ8
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Position
IV:complement(1524176..1525880)
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AA seq
494 aa
AA seq
DB search
MTTNMLAPVRTYALRSFRELRIVANDEQMPNDQIPFIKLMKGDKGSAEIFGRELSPEIEL
KITHGARLALYTWRGCTVQVRGTVNQEYEAPDNAMKEYINVAYALDAQRELSVISGDYGP
RVLVTGSPSSGKSSACLMLLNYALRNGWTPFFVEADPRGSTDKDVLHSYPGVISSFVYQS
VDYTSAVNQLNYFFGHAEIEEDLGLYYHINKCIASAIDSVTDKNFKVQPQGKRTDESQDF
GKFIKSSGIIINAPYQASQKIICKLVKLYRITTVLVIDNPSLNHVLNESFSDKSNQPTAQ
IVGGMAFTTDNSNCDQTEQTSNTKKTVILGLSKLEGALSVDNQRIKYIKDATWKRYFGLD
KSSATFGFHVIRFKLSQVKFITFESNSLLGSEALPTDQESSCEMVTANIWAGMAKTLVNT
ILAVVSTSELELAPFANVECFVHLKSVEDMPVDPNGNDKAEFIGEILCPSKYTSSNLPPF
LVVPGTLRAMKWLQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaatatgttagctcccgttagaacatacgcactgagatcatttcgcgagttg
agaattgtggcaaatgacgaacaaatgcctaatgatcagattccatttataaagttgatg
aagggagataagggcagtgcagagattttcggccgcgaactatcgccagaaatagaatta
aaaataacacatggagctagattggctttgtatacatggaggggctgtactgtacaagtt
cgaggtacagtaaatcaggaatacgaagcccctgataatgccatgaaggaatacataaac
gtggcttatgctttggacgctcaaagagaattgtcagttataagcggtgattatgggcca
agggttttggtaaccggttcacccagcagtggcaaatcatcagcatgcttaatgctgcta
aattatgctctgaggaatggctggactccattttttgtagaggctgatcccaggggctca
actgacaaagacgttttacactcttatcccggggtaataagttcatttgtgtatcagtca
gtagactatacaagtgctgtaaatcaattgaattacttctttggacatgcagaaattgaa
gaggatttgggactatattatcacattaataaatgtatagcatctgccattgacagtgta
acagataaaaattttaaagtacaaccacagggcaaacgcacggatgaatctcaggatttt
ggcaaatttattaaatcttcaggcataataattaatgcgccttaccaagcatctcagaaa
atcatttgtaaattggtaaaattgtacagaataactacagtactagttatcgataatcca
tcgctaaatcatgtgctgaatgagtcattcagtgacaaatctaaccaacccacggctcaa
attgtgggcgggatggcctttactacagacaatagtaattgtgatcaaactgagcaaacg
agtaatacaaaaaaaacagtgattttgggcctatctaaactagaaggggcactatcagtg
gacaatcaacgcattaaatatataaaggatgccacttggaagagatactttgggttggac
aaaagttcagcaacatttggcttccacgtcattcgatttaaattatcgcaggtcaaattt
atcactttcgaatcaaactcgcttttaggttctgaagcattgcccacagaccaagagtca
agttgcgaaatggtaacagcaaatatttgggctggaatggcaaagacacttgtcaataca
attttggcagtagtttctactagtgaattggaattagcaccattcgcaaatgttgaatgt
tttgtccacctgaaatctgtagaagatatgcctgtggatcctaacggtaatgacaaggcg
gaatttataggggagatactatgcccgtcaaagtatacctcgtcaaatctacctccattc
ctagtcgtgcctgggaccctgagggccatgaaatggcttcagtaa
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