Babesia microti: BmR1_04g09740
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Entry
BmR1_04g09740 CDS
T05554
Name
(RefSeq) Putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
bmic
Babesia microti
Pathway
bmic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
BmR1_04g09740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmic03021
]
BmR1_04g09740
03019 Messenger RNA biogenesis [BR:
bmic03019
]
BmR1_04g09740
Transcription machinery [BR:
bmic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
BmR1_04g09740
RNA polymerase I system
BmR1_04g09740
Messenger RNA biogenesis [BR:
bmic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
BmR1_04g09740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Motif
Other DBs
NCBI-GeneID:
24426570
NCBI-ProteinID:
XP_012650523
UniProt:
I7JE06
LinkDB
All DBs
Position
IV:1736618..1739565
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AA seq
943 aa
AA seq
DB search
MPQEKTESSDNPEEMDSLNFGDKDDADFKGSADSKSKKSGNTLKRRRYKISNKKHDRRID
VSAFLDTEAMEDEEDEDYDYDDGILDLSKESAEAERLEQRRIRMESLTKDGRERRRAGGA
AHLETAIDSLTKRYQNLHESEDADELADELADELADEQLFDMPIYDDVSESTSFLPDLSD
PKLWLVKLSKSGLARELAISIQNKFFTLKRRGIDLGVFSSFASDTLTNYLYIEADNKRDV
IDALTGLRNVYINSVKMVPLSEMPSVFNVVLPDASIPRIDEYVRVRTGLYKGDLGQVFEV
DVNNGRVTLRLIPRLDMPTNDQLQSSSQSLEPTVKNVSANGSTGTGFSGMKRPPKNFFNR
LEVEEAGGLLEVGFYPGTVRYNNHTFEDSGHILYRISLKGIVTGAHVEATLKELKEFNQR
RNVSFDQEALKVTKAKRTLGLYKLGERVKVIKGELTNLKGKIIGVSTNYVKVDTEELGID
SFDVPWGDFVKYFEEGDSVRAISGINAGETGLISLVDLPNRSAVVFSPLSGQEFRCSLEN
LSLTRSEGTGGQKLLSLNGYTMGDLVQLTNGTIGVLVYIDKNRIAKFLTVNSQLIVGNLS
QILCKRNNADQVTKDANMASVRCKCNVIISKGPLKGKNALVLHIWQSWVFLMLADYARGK
AGAIHQYVTETSVTCLEGEDVICLNPHTSSQSPTHSLGSNDKKQFDGTNNNTRGGSRYIN
PFIGKTVKILVGRYKGLLADIVKVEPDRFTVLLKVKPQTMRYKKAECLVIDSVGGGMDCG
FERTHHSSRFSSKPPSHINTSSSADGDKGDDRHMQSVPKISSDINRNILFTQKYCKGSVV
EITGAGAYQGKTGIVGETISGSRETDFTILHLFVDDDYIAIASESVKPKIPSETSQQVIV
MQNGINMNKTGTLVQLDGTMGVVQTSTDYLSVPVEQLCLYVSM
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagaaaaaactgaatctagtgacaatccagaagaaatggactcccttaatttt
ggggacaaagatgacgcagattttaaaggcagtgcggatagtaaatcgaaaaaatcaggg
aatacgttaaaaaggcgccgatataaaatatctaacaagaaacatgaccgcagaattgat
gtttcagcatttttggatactgaggccatggaagatgaggaggacgaggactatgattat
gacgatgggatattagacttgtctaaggaatctgcagaggcagaaaggcttgaacagcga
agaattaggatggaaagtttgactaaagatgggagagaaaggagaagggctgggggtgca
gctcatttggaaactgcaattgacagtctgaccaagcgttaccaaaatctacacgagtca
gaggatgctgatgaactggctgatgagctggctgatgagctggctgatgaacaattgttt
gacatgcctatatacgatgatgtaagtgagtccacatcgttcctaccagacctttccgat
cctaaactatggttagttaaattatccaaaagtggattagccagggaactagctatttca
attcaaaacaagtttttcacgctcaaacgacgtggcatagacttgggagtgttctcctca
tttgcttctgatactctgactaattatttgtacatcgaagcagacaacaaacgggatgta
atagatgccttaactggcttgaggaatgtgtacataaatagcgtgaaaatggtcccatta
tctgaaatgccttcagtgtttaatgtagtactaccagacgcgtcaataccacgcattgat
gaatatgtacgagttcggactgggttatacaaaggagacttagggcaggtgttcgaggta
gatgttaataatggtcgggtcacgctcagattgatccctaggctagatatgccaacaaat
gatcaattgcagtcatcatcgcaatccctagaaccaacggtaaagaatgtgagtgccaat
ggcagtactggcactgggtttagtggtatgaaaagaccgcctaaaaactttttcaatcgg
ttggaggttgaagaggctggtggcttgctagaagttggattttaccctggcactgtgcga
tacaacaatcatacttttgaagactctgggcatatcctgtacagaatcagcctcaaggga
attgttacgggtgctcatgttgaggctacccttaaagaattgaaggaatttaatcaacgc
aggaatgtttcctttgaccaagaggcccttaaagttaccaaggccaaacgaacgttgggt
ctatataagttgggggagagggtgaaagttattaagggcgagctcactaacttgaagggt
aaaataattggcgtgtcaacgaactatgtgaaagtggacacggaggagttgggaattgac
agttttgatgtgccttggggggattttgtcaagtattttgaggagggagattcagttcgt
gctattagcggcattaacgctggtgagactgggttaatcagcctagtggatcttcctaac
cgttctgctgtagtcttttcgccactttcgggacaagaatttagatgttcattggaaaat
ttgtcgctaactagatctgaaggcactggaggacagaaactactcagcctaaacggttat
acaatgggtgatttggtacaacttacaaatggtacgattggtgtgttggtctacattgac
aaaaataggatagctaagtttttgacagtcaattcacagcttatcgtgggcaatttgtcg
cagattttgtgcaaacggaataatgccgatcaagtgacaaaggatgcaaatatggcaagt
gtccgctgcaagtgcaacgttattatttcaaagggcccattgaagggtaaaaatgcgcta
gtgcttcacatttggcaatcgtgggtttttttaatgttggctgattatgcccgaggaaaa
gcgggtgcaattcaccaatatgttacggaaacctccgtaacatgtttggaaggtgaagat
gttatttgtctcaatccacacacatccagccaatcaccaactcacagtctcggttctaac
gacaagaaacaatttgacggcacaaataataatacgaggggcggtagcaggtatattaac
ccctttattggcaagactgtaaagattttagtaggcaggtataagggattactcgcggat
attgttaaagtagagccagatcgatttacagtattgctgaaggtgaaaccgcagacaatg
cggtacaagaaggcagaatgcttggtaattgatagtgtcggaggcggtatggattgtggt
tttgaacgcacacatcattcctctagattttctagcaaaccaccatcacatatcaacact
agttctagtgctgatggtgataagggtgatgatagacatatgcaatctgtacccaaaata
tcatccgatattaatcgcaacatattattcacccaaaaatattgtaaaggttctgtagta
gagatcacaggcgccggggcttatcagggtaaaactggaatagttggggagacgatttca
gggtcccgtgaaacagatttcacgatcttacacttgtttgtagacgacgactatatcgcc
atagcttctgagtctgtaaaaccaaaaattccatctgaaactagtcaacaagtaattgtt
atgcaaaatggaattaacatgaacaagacagggacattggttcaactggatggtactatg
ggcgttgtacaaactagtaccgactatctgtccgtgccagttgagcaactatgtctatat
gtatctatgtga
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