Babesia microti: BmR1_04g09930
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Entry
BmR1_04g09930 CDS
T05554
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
bmic
Babesia microti
Pathway
bmic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BmR1_04g09930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmic03041
]
BmR1_04g09930
Enzymes [BR:
bmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BmR1_04g09930
Spliceosome [BR:
bmic03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
BmR1_04g09930
Complex B
BmR1_04g09930
Complex C
U2 SnRNP specific factors
BmR1_04g09930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
Cas3-like_C_2
AAA_19
SWI2_SNF2
ApbA
Motif
Other DBs
NCBI-GeneID:
24426609
NCBI-ProteinID:
XP_012650560
UniProt:
I7IHP1
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All DBs
Position
IV:complement(1797054..1798634)
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AA seq
526 aa
AA seq
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MEEIDPLDAFMQSLNDTIGSYKNEDKSGVKRGIDELDEEYDIADFCEYMNTKEYLDRLNP
GNEDTKESNSSKPFPLLLSAESSEPPFYNFTYTHISEIESMSLDELTRLKEKLRICTTGS
RVPTPITKFDHISHCMPDKLMDNIKKMGFITPTPIQCQAIPSILMKRDTIIFGETGSGKT
LSFLLPMTSLLSEHLKHDKDVNKFDLNCLVITPTRELCMQHYNTFKKLSKDIGITTVALM
GDVDKAFLIKTLSKGCHVIISSMGRLADFVHSKVIDLSHIKLLVIDEADKLFTPINIKQT
ESLIGGTPTNKITVFVSATKTDKILDSMRKLAKSPIVISVGNPEAGYPIDKVDVNFIITQ
TLANKKLWLFDILPMLEDKGQVIIFCNTKSQVEELAEILNDPAIRQTNKVAIFARGIHGQ
MSANDRDNVVEKFKKLLFPTLVTTSVFSRGIDIASIKVVINFDAPKHFHEYCHRIGRCSR
GESNGIAYTLIDPKRDLKMVIRIVEHLQMFGREVPNDLLKIVRGFK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatagatccattggacgcattcatgcaatctctaaatgataccattggatct
tacaaaaatgaagataaatctggtgttaaaaggggcatagatgaattggatgaggaatat
gacattgccgatttctgcgagtacatgaataccaaagagtatttggatagactgaatcca
gggaatgaagatacaaaggaaagcaattctagtaaaccatttccactgcttctatcggca
gaatcctcagagcctccgttttataacttcacttatacgcacatttctgagattgagtct
atgagtttagatgaattaactaggctcaaggagaaattgaggatttgtaccactggatca
cgagttccaacccctataactaaatttgatcacatatcccactgcatgcctgataaatta
atggataatatcaaaaaaatgggatttattacacctactcccatccaatgtcaagccata
ccgtcaattttaatgaagagagacaccattattttcggtgaaactgggtctggcaagaca
ttatcatttctacttcctatgacatcccttctttctgagcatttaaaacatgataaggat
gtcaataaatttgatctcaattgtttagtaataacccctactagggaactgtgtatgcaa
cactataacacatttaaaaaacttagtaaagatataggtattacgacagtggcgttaatg
ggagatgtagacaaagcttttcttatcaaaactctttcaaaaggttgccatgttatcatt
tccagtatgggcagattggcagattttgtgcattccaaagttattgatctatcacacata
aagctactagtgattgatgaagcagacaaacttttcactcccataaacatcaagcaaact
gaaagtttgattggggggacaccaacaaataaaattaccgtatttgtaagcgctaccaag
actgataagatattggattccatgagaaaattggccaaatcccctatagttattagtgta
gggaatccagaagcgggttatcccattgataaagtggatgtaaactttataataacacaa
acacttgctaataaaaaattatggctatttgacatattgccaatgcttgaggataagggg
caagtgataatattttgtaataccaaatcacaagtagaagaattggcagagattctaaac
gatccagctataagacaaacgaataaagtggcaatatttgctaggggaatacacggacaa
atgagtgctaatgatagggataatgttgttgagaaatttaagaaactccttttcccaact
ctagtaaccacaagtgtattttctcggggtattgatattgccagcataaaagttgttata
aactttgatgcacccaagcattttcacgaatattgccatagaatcggtcgttgcagtagg
ggggaaagtaatggcatcgcatatactctaattgacccaaagagagatttgaaaatggta
atcaggattgtcgaacatttgcaaatgtttggcagggaagtacctaacgatttactaaaa
attgtccggggtttcaagtaa
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