Borrelia miyamotoi CT14D4: RJ61_02470
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Entry
RJ61_02470 CDS
T03577
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bmiy
Borrelia miyamotoi CT14D4
Pathway
bmiy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmiy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RJ61_02470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmiy03021
]
RJ61_02470
03400 DNA repair and recombination proteins [BR:
bmiy03400
]
RJ61_02470
Enzymes [BR:
bmiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RJ61_02470
Transcription machinery [BR:
bmiy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RJ61_02470
DNA repair and recombination proteins [BR:
bmiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RJ61_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
CT0912-like_C
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AJA58647
UniProt:
A0AAQ3AG71
LinkDB
All DBs
Position
509212..510243
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AA seq
343 aa
AA seq
DB search
MSLGKLLKDFTIPDRIEFLRGEDNGSYGKFIIYPFEKGFGVTIGNTLRRVLLSSIEGYAV
SAMRIQSNQSGSLKIVSSEFDLIPGVVEDTLEVIANIKNINLKLDEGVNSKTISINVNGK
DTNVLKAAHLEREGVEVFNKDLVIATLSGEANLDFEFQVNYGRGYISSEQNAKYLEEVNT
IAIDSIFSPIEKVTYFIEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASVVREFLLP
LVNFEDKVVHSVEDSEFGDSDILSMSIDKLNLSVRSLNCLTKENVKTLGELISKTPEELS
KARNFGKKSLEEIVEKLNSYGLFLGMPKAEALKILNKNDKISN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaggaaagcttttgaaagattttactatacctgataggattgagtttttaagg
ggagaagataatggctcttatggaaagtttataatatatccttttgagaaaggttttggt
gtcactattggaaatactttaagacgagtcttgttatcttctattgaaggatatgctgtt
tctgctatgagaattcagtctaatcaaagtggatctttgaagattgtttcaagtgaattt
gatttaatacctggtgttgtagaagatacacttgaagtaattgctaatattaaaaatatt
aatttaaagttagatgagggagttaacagtaaaacgataagtattaatgttaatggtaaa
gatactaatgttttaaaggcagcccatcttgaaagggagggtgttgaggtatttaataaa
gatttagttattgcgacactttcaggtgaagcgaatttagattttgaatttcaggtcaac
tatgggagagggtatatttcttctgaacaaaatgcaaaatatttagaagaagttaatacc
attgcgattgattctatattttctccaatagaaaaggtgacgtattttattgaagatact
agagtgggacaaaggtctgattatgataagcttgttatggaaatttggacaacaggtgta
attagtgctaaggatgccattaaaaaggcagcttctgtagtgagggagtttttactgcca
ttagttaattttgaagataaagttgttcattctgttgaggattctgaatttggagattct
gatatacttagcatgagtattgataaattaaatttgtctgtcagatctctgaattgttta
actaaggaaaatgttaaaactttaggagaacttattagtaaaactccagaggaactttca
aaagcaagaaattttggtaaaaaaagtttagaggagatagttgaaaaacttaattcttat
ggattatttttgggaatgcctaaggcagaagctctaaaaatcttgaataagaacgataaa
atatctaattag
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