Borrelia miyamotoi CT14D4: RJ61_02480
Help
Entry
RJ61_02480 CDS
T03577
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bmiy
Borrelia miyamotoi CT14D4
Pathway
bmiy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmiy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RJ61_02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmiy03019
]
RJ61_02480
Messenger RNA biogenesis [BR:
bmiy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RJ61_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_2
HDOD
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
AJA58649
LinkDB
All DBs
Position
510705..512246
Genome browser
AA seq
513 aa
AA seq
DB search
MSYITFSSILAGILGVVLGFVIRIILGRFSLLNLDKKLKRVQEEAILEIENERKRIISHT
KAQMLKDKNQQDREIRERKNEVFNLERRLLQREETLDKRISALDKQQSRIDFKLKEFEQK
EKIIRDKELSLVKKLENISGLTKEEARKIVIERIENESKRDAQVIINKSEQEAQLLADKL
AKDILVSTMQRIVTEVSSEFTVTSVELPNDEMKGRIIGKEGRNIRVLETLIGADIIIDDT
PEAVVISCFDPVRKEIAKRTLERLIADGRIHPARIEEVVYIVTNEINSIILEEGEKAVFD
LNIHGFDKRLIRGLGRLYFRSSYGQNVLSHSKETAIIGEILAKEMKLDPVVVKRACLLHD
IGKGMESISENSEGHAITGAELAQSCGESDIVVNAIASHHNEIKPESFEAIVVQIADAIS
ASRPGARRESLNNYISRLKRLEEIAYGFEGVQKCYAIQAGREVRIIVDNLLINDEKATML
ARDIAKKIEIEMRYPGKIKVTIIRETRVIEYAR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatattactttttcttctattcttgctggtatcctaggtgttgtattaggtttt
gtaataagaattattttaggtagattttctttattaaatttagacaaaaaactaaagaga
gtacaggaagaggcaatcttagagatagaaaatgaaagaaagcgaattatttcacataca
aaagctcaaatgcttaaagataagaaccagcaggatagggaaataagagaacgaaaaaat
gaggtttttaatttagaaagaagattattacaaagagaagaaactttagataagagaata
tcagctcttgacaagcagcaaagtaggattgactttaagcttaaggagtttgagcaaaaa
gaaaaaataatacgagataaggaattatctcttgttaaaaaattggaaaatatttccggt
cttactaaagaagaagcaagaaagattgtaattgaaagaattgaaaatgagtctaaaaga
gacgctcaagtaattattaataaaagtgagcaagaggctcagctcttagcagacaagcta
gcaaaagatatattagtttctactatgcaacgcatagtaactgaagtcagctctgaattt
acagttacttctgttgaactgcctaatgatgagatgaaaggtagaattatcggtaaagaa
ggacgtaatattagggttcttgaaacgttaataggtgcagatattatcattgatgacact
cctgaagctgtagttatatcttgttttgatccagtgagaaaggaaatagctaaaagaact
cttgaaagacttattgctgacggaagaattcaccctgcaagaattgaagaggtcgtatat
attgttacaaatgagattaatagtatcattcttgaggaaggcgagaaagcagtatttgat
ttaaatatacatggatttgataagaggcttattagaggtcttggaagactttactttaga
agcagttatggtcaaaacgttctgagtcattcaaaagaaacagcaataataggggaaatt
ttagctaaagaaatgaaattagatccggttgttgtaaaaagagcatgtcttttgcatgat
attggaaagggtatggagagtatttctgagaatagtgagggacatgctattacaggtgct
gagcttgctcagagttgtggggagagcgatattgttgtcaatgctattgcttcgcatcat
aatgagatcaagcctgaaagttttgaggctattgttgttcagatagctgatgctatttct
gcttctcgtcctggtgcaagacgtgaaagtttgaacaattatataagtaggcttaagaga
cttgaagagattgcgtatggttttgagggtgttcagaagtgttatgcaattcaagcgggt
cgtgaagttagaattattgttgacaatctattaattaacgatgagaaagctactatgctt
gcaagagatattgcaaagaaaatagaaattgagatgaggtatcctggtaaaataaaagtt
actattattcgtgagaccagagttattgagtatgcaagataa
DBGET
integrated database retrieval system