Borrelia miyamotoi CT14D4: RJ61_04105
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Entry
RJ61_04105 CDS
T03577
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bmiy
Borrelia miyamotoi CT14D4
Brite
KEGG Orthology (KO) [BR:
bmiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmiy03032
]
RJ61_04105
03400 DNA repair and recombination proteins [BR:
bmiy03400
]
RJ61_04105
Enzymes [BR:
bmiy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RJ61_04105
DNA replication proteins [BR:
bmiy03032
]
Prokaryotic type
DNA Topoisomerases
RJ61_04105
DNA repair and recombination proteins [BR:
bmiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RJ61_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Toprim_4
Toprim_2
DUF3854
Motif
Other DBs
NCBI-ProteinID:
AJA58912
UniProt:
A0AAQ3AG94
LinkDB
All DBs
Position
complement(876953..879490)
Genome browser
AA seq
845 aa
AA seq
DB search
MQQKKLIIVESPTKATTIKKYLDGSFSVEACIGHIRDLPNSAKEIPEEYKKFEWANLSID
YQNNFKPLYIIPSKKKNVIEKLKNLIKEKDEIYLATDQDREGETIAFHLKEVLKIKNYKR
MVFHEITKSAIVDSLNNTREINMNLVNAGETRRILDRLYGYTISPLLWKKIAYGLSAGRV
QSVGLQLIIEKETSRINFKKANYYSIILECKHKKNDIQIEAILEKIENKNVAESKDFLND
TGTLQNPDKTIVIEKALMNILKNKLKKTKEIEVISIETKNVKQTAPKPFITSSLQQEVNR
RLKIGTKQIMNYAQKLYENGYITYMRTDSYNITKTARDKIKTIVKEKYSEEYIEMNDRAY
AKAKMAQDAHEAIRPSEMFTPPEKIKIESKTARAIYKIIWDRTIESFMKDAIKKVIKITF
KYENLTFKSSFTKMIFDGFLKNNKEYYEENIIDFSLIKEGDKFIILNIKQEEHETKPPVR
YTEASLVQKLEKEGIGRPSTYSTIISTLFEREYIFKQNNTLIPTIKGAAVINLLKKYFPV
LIELKFTSHMEENLDKISIGTLDKVKYLSKFYNGAEGLKNTINKIEPIISPEEFRIVYEY
KNDEKFHYKINIGKFGPYLISNGNNYSINVKTPLESLYKEDEIKKIIAEKEIKPNILGVD
PETGLNVIYKNSKYGGIVQLGEDVYAPQEFTKTGKPKKPKIIKAKKVSTKNIEYANINLE
LALKLLSLPKIIGEYPKINEKIIATTGIFGDYIKTEKNSIICTLKKDIKAYEITLEESIK
LLDEKLEKNGIIVKIIPLSKNKVGNKIYVYKQNDKFYAKIKRTKVYLPPGIDLSKIDATY
VFGLM
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaaaaaaattaataatagtagaatcacctacaaaagcaacaacaataaagaaa
tatcttgatggctcattttcagtggaagcttgcataggacatataagagatttacccaat
agtgctaaagaaatacctgaagaatataaaaaatttgaatgggcaaacctttctatagat
tatcaaaacaactttaaaccgctatacattattccaagtaaaaaaaagaatgtaattgaa
aaacttaaaaatctcataaaggaaaaagatgagatatatcttgcaactgaccaagataga
gaaggagaaacaatagcattccatctaaaagaagttctaaaaattaaaaattataaaaga
atggtatttcatgaaatcacaaaaagtgcaatagtagactcacttaataatacaagagaa
attaatatgaatctagttaatgccggggaaacaagaagaatactagataggctttatgga
tacaccatatctcctctactttggaaaaaaattgcatatggactctctgctggcagagta
caatctgttggactgcaattaatcatagaaaaagaaacatcaagaataaattttaaaaaa
gccaattattactcaattatacttgaatgtaaacataaaaaaaatgacatacagattgaa
gcaatattagaaaaaattgagaataaaaatgtagctgagagtaaagattttttaaacgat
acaggaactttacaaaatcctgataaaacaattgtaatagaaaaagcattaatgaacata
ctgaaaaacaagttaaaaaagacaaaagagatagaggtgatctctattgaaacaaaaaat
gtaaaacaaactgctcccaaacccttcattacatcctcacttcaacaagaagtaaacaga
cgattaaaaataggaactaaacaaattatgaattatgctcaaaaactgtatgagaatggt
tatatcacttatatgagaacagattcttataatattacaaaaactgcaagagataaaata
aaaactatcgtaaaagaaaaatatagtgaagaatatatagaaatgaatgacagagcatat
gctaaagctaaaatggctcaagatgcacatgaagccataagaccttctgaaatgttcact
cctcctgagaaaataaaaatagaaagcaagaccgccagagcaatatataaaataatatgg
gatagaactatcgaatcctttatgaaagacgcaataaaaaaagttatcaaaataacattc
aaatatgaaaatttgacctttaaatcaagtttcacaaaaatgatttttgatggatttctg
aaaaataataaagaatattatgaagagaatatcatagacttttctctcataaaagaagga
gataaatttataatattaaatataaagcaagaagaacatgaaacaaagcctccagttaga
tatacagaagcatcacttgtacaaaaacttgaaaaagaaggcataggacgcccttcaact
tattccactattatttcaacactctttgaaagagaatatatctttaaacaaaacaacaca
ttaataccaacaataaaaggagctgcagtcataaatttattaaaaaaatattttccagta
ctcattgaactaaaattcacatctcatatggaagaaaacttagacaagatctcaataggt
acactagataaagtaaaatatctaagtaaattttataatggtgcagaaggtctaaagaat
acaataaataaaatagaacctattattagccctgaagaatttagaatagtctatgaatac
aagaatgatgagaaatttcattataaaatcaacattgggaaattcggtccttatctaatc
tctaacggaaataattactcgattaatgtaaaaacaccattagaaagcttatacaaagaa
gatgaaatcaaaaaaataatagcagaaaaagaaataaaacctaatatattaggggttgat
cctgaaacaggacttaatgtaatatacaagaattcgaaatatggaggaattgttcaactt
ggagaagatgtatatgctccacaagaattcacaaaaacaggcaaaccaaaaaaacctaaa
ataataaaagctaaaaaagtttcaacaaaaaacatagaatatgcaaacataaacttagaa
cttgctttaaaactactctcacttccaaaaataattggggaatatcccaaaattaatgaa
aaaataattgctacaacagggatttttggagattatattaaaactgaaaaaaacagcata
atatgtacactaaaaaaagacataaaggcatacgaaataacactagaagaatcaatcaaa
ctcttagacgaaaaattagaaaaaaacggaattattgtaaaaataataccactatcaaaa
aacaaagtcggcaataaaatctatgtttacaaacaaaatgataaattctatgctaaaatt
aaaagaactaaagtctatttgcctcctggcattgaccttagtaaaatagatgcaacttat
gtttttggactaatgtag
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