Burkholderia multivorans ATCC 17616 (Tohoku): BMULJ_01048
Help
Entry
BMULJ_01048 CDS
T00740
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bmj
Burkholderia multivorans ATCC 17616 (Tohoku)
Pathway
bmj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMULJ_01048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmj03019
]
BMULJ_01048
03009 Ribosome biogenesis [BR:
bmj03009
]
BMULJ_01048
Enzymes [BR:
bmj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BMULJ_01048
Messenger RNA biogenesis [BR:
bmj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BMULJ_01048
Ribosome biogenesis [BR:
bmj03009
]
Prokaryotic type
rRNA processing factors
BMULJ_01048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BAG42992
UniProt:
A0A0H3KI46
LinkDB
All DBs
Position
1:complement(1114083..1117247)
Genome browser
AA seq
1054 aa
AA seq
DB search
MKRMLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVVTRIEPSLEACFVNY
GEDRHGFLPFKEVARQYFKDGVDMRSARIQDALREGQELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGDERQELRETMAQLQIPDGMSMIARTAGIGRSAEELQ
WDLNYLLQLWRAIEAASQSGNPGQPMLIYLESSLVIRAIRDYFQPDIGEILIDTTEIYDQ
ARAFMDIVMPDNVSKVKRYHDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALV
AIDVNSARATKGADIEETATRTNLEAADEVARQLRLRDLGGLIVIDFIDMESAKSQREVE
QRLKDALKHDRARVQMGKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRDTESSA
LQVLRIIQEEAMKENTAAIHCQVPVEVTAFLLNEKRQEINKIESRFKVGIVLIPNKHLDT
PHYKLERLRHDDARLDDPRASWKMAEEAARELESETGYSKRAADVKPKQEAAVKGITPER
PAPSPAPQRPVEPAAAPAPAPVAQPSGGFIGWLKGLFGMSPAPAPAPVAPAPAKEQAARP
ARERAEKTEQRGERGGDRNRNRRGGNGQQAQGGRDQVAAGRGQPQRQEREGKEAREPREG
REGREGREGRENREAREGREGREGRAPREAREPRENREPREAREPRERAEQPEAVEAARG
ERQERGERRERGERRKPQHAATLETVNRGESHPEQDADKAAAALPGADVAADAEAGARDG
EERRRRRRGRRGGRRERDEEGAVVDQAEAGLDGEAAAQPAAHEAPVAEPAHANAPATVAA
AAAAGVIVAETVVEQRAESVAVETPSAPAHADSDSVAVAEPVVAAAPAAAPAPVVAPAAD
VEAGPVALAVSPTDAFEVPADVEAPVAVDVQPADTAVVAEAAPAVAAPAAPAAPAVAPAP
VEAAPVEPVATPAPAPAAAPAPAVAQPSAAPASASLEAVLQQAGLVWVNTDAEKLRAAQE
AASRLPRPVRTPRERKPLPPVDTTPMQQVETTHR
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatgctgttcaatgcgacgcagcaggaggagctgcgcgtcgccatcgtcgat
gggcaaaagctcatcgacatcgacatcgagacagccgggcgcgaacagcgcaaaggcaat
atctacaaaggtgtcgtcacgcgcatcgagccgtcgctcgaagcgtgcttcgtcaactac
ggcgaagaccgccacggcttcctgccgttcaaggaagtcgcccgccagtacttcaaggac
ggcgtcgacatgcgctccgcgcgcatccaggacgcgctgcgcgaaggccaggaactgatc
gttcaggtcgagaaggaagagcgcggcaacaagggcgccgccctcaccacgttcatctcg
ctcgccggccgctacctcgtgctgatgccgaacaacccgcgcggcggcggcgtgtcgcgc
cggatcgagggcgacgagcgtcaggaactgcgcgaaacgatggcgcagctgcagattccg
gacgggatgagcatgatcgcccgcaccgcagggatcggccgcagcgccgaggaactgcag
tgggacctgaactacctgctgcagctctggcgcgcgatcgaagccgcgtcgcagagcggc
aaccccggccagccgatgctgatctatctggaatcgagcctcgtgatccgcgcgatccgg
gactatttccagcccgacatcggcgaaatcctgatcgacacgaccgagatctacgatcag
gcccgcgcattcatggacatcgtgatgccggacaacgtgtcgaaggtgaagcgctaccac
gacgacgtgccgctgttctcgcgcttccagatcgagcaccagatcgaaacggcctactcg
cgcacggtgccgctgccgtcgggcggcgcgatcgtgatcgaccacaccgaagcgctcgtc
gcgatcgacgtgaactcggcgcgcgccaccaagggcgccgacatcgaggaaacggcgacc
cgcacgaacctcgaagcggccgacgaagtcgcccgccagctgcgcctgcgcgacctcggc
ggcctgatcgtgatcgatttcatcgacatggaatcggcgaagagccagcgcgaagtcgag
cagcgcctgaaggacgcgctgaagcacgaccgcgcacgcgtccagatgggcaagatctcg
cgcttcggcctgatggagctgtcgcgccagcgtctgcgtccggcgctgtcggaaggcagc
cacgtgacctgcccgcgctgcaacggcacgggccacatccgcgacaccgaatcgtccgcg
ctgcaagtgctgcggatcattcaggaagaagcgatgaaggaaaacaccgcggcgatccac
tgccaggtgccggtcgaagtgaccgccttcctgctcaacgaaaagcgtcaggaaatcaac
aagatcgagtcgcgcttcaaggtcggcatcgtgctgatcccgaacaagcacctcgacacg
ccgcactacaagctcgaacgcctgcgtcacgatgacgcacgcctcgacgatccgcgcgcc
tcgtggaagatggccgaggaagcggcgcgcgaactggagtcggaaaccggctacagcaag
cgcgcggccgacgtgaagccgaagcaggaagccgcggtcaagggcatcacgcccgagcgt
ccggcaccgagcccggcgccgcagcgtccggtcgagccggcagcggcaccggcccccgcg
ccggtcgcgcagccgagcggcggcttcatcggctggctgaagggcctgttcggcatgtcg
cccgctccggcgcccgcgccggtcgcaccggcaccggcgaaggaacaggcggcccgtccg
gcccgcgaacgcgccgagaagaccgagcagcgcggtgaacgcggcggcgatcgcaaccgc
aatcgtcgcggcggcaatggccagcaggcgcaaggcggtcgcgaccaggtggccgcaggc
cgcggccagccgcaacgtcaggaacgcgaaggcaaggaagcgcgcgagccgcgtgaaggt
cgagagggtcgcgagggtcgtgaaggtcgagagaaccgcgaagctcgcgaaggccgtgag
ggtcgcgaaggccgcgcaccgcgcgaagcacgcgaaccgcgcgagaaccgcgagccgcgc
gaagcccgtgagccgcgcgagcgcgccgagcagccggaggccgtcgaggccgcccgcggc
gagcgccaggaacgcggcgagcgtcgcgagcgcggcgaacgccgcaagccgcagcatgcg
gcgacgctcgaaaccgtgaaccgcggcgaaagccatccggaacaggacgccgacaaggcg
gccgccgccctgccgggcgcggacgtcgcagcggatgccgaagccggcgcgcgtgacggc
gaagagcgccgtcgccgccgccgcggccgtcgcggcggtcgtcgcgagcgtgacgaggaa
ggcgcagtggtcgatcaggccgaagcgggcctcgacggcgaagccgccgcgcaaccggcg
gcgcacgaagcgccggtggccgagccggcccacgcgaacgcgccggccaccgtcgcggca
gccgctgcggccggcgtgatcgtcgccgaaacggtcgtcgaacagcgtgccgaatcggtc
gcggtcgagacgccgtcggcgccggcccatgccgacagtgactccgtcgccgtcgcggaa
ccggtcgtcgccgccgcaccggctgcggcaccggccccggtcgtcgcaccggcagccgac
gtcgaagcgggccccgttgcgctcgccgtttcgccgaccgacgcgttcgaagtgccggcc
gacgtggaagcgccggttgccgtcgacgtgcagccggccgacacggcagtcgttgccgag
gcagcaccggccgtggcggctccggcagcaccggccgctccggctgtcgcaccggcgccg
gtcgaagccgcaccggtcgaaccggtcgcgactccggctccggccccggctgccgctccg
gcacctgccgtcgcccagccgtccgccgcgcccgcttccgcgagcctggaagccgtgctg
cagcaggcgggcctcgtgtgggtgaataccgacgcggagaaactgcgtgcggcgcaggaa
gccgcatcgcgtctgccgcgcccggtgcgcacgccgcgcgagcgcaagccgctgccgccg
gtcgacacgacgccgatgcagcaggtcgagacgacgcaccgctaa
DBGET
integrated database retrieval system
