Burkholderia multivorans ATCC 17616 (Tohoku): BMULJ_02303
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Entry
BMULJ_02303 CDS
T00740
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bmj
Burkholderia multivorans ATCC 17616 (Tohoku)
Pathway
bmj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMULJ_02303 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmj03019
]
BMULJ_02303 (deaD)
Enzymes [BR:
bmj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMULJ_02303 (deaD)
Messenger RNA biogenesis [BR:
bmj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMULJ_02303 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BAG44198
UniProt:
A0A0H3KQ92
LinkDB
All DBs
Position
1:complement(2470864..2472327)
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AA seq
487 aa
AA seq
DB search
MSDSVAKPVDATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVA
EGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARQLERDGVVASAIHGDKSQLERMQAL
DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSL
CSPNERKQLADIEKLIKRPLEVQTLVLDKPARHRHDERGGERGGERGGRRDRDEHRGASG
RRSPGAERGHHRRHEPPVDDFFLKPYEPSAPTKQAEDTKPAQPEKKTPKRQVAALLGGFG
MPRKPTS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgtcgccaagcctgtcgacgccaccttcgatcaattcggccttgccgcc
gacatcctgaaagccattgcggagcagggctatacgacgccgacgccgatccaggcgcag
gccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggcaccggc
aagaccgcgagcttctcgctgccgatcatccagcgtctgctgccgcaggcgaacacgagc
gcgtcgcccgcgcgccaccccgtgcgtgcgctgatcctcacgccgacgcgcgaactcgcc
gaccaggtcgccgcgaacgtgcatgcgtacgcgaaacacacgccgctgcgcagcgcggtc
gtgttcggcggcgtcgacatgaatccgcagatggcggaactgcgccgcggcgtcgaaatc
ctgatcgcgacgccgggccgtctgctcgaccacgtgcagcaaaagaccgcgaacctcggc
caggtacagatcctcgtgctcgacgaagcggaccggatgctcgacatgggctttctgccc
gacctgcagcgcatcctgaacctgctgccgaaggagcgtcagacgctgctgttctcggcg
acgttctcgcccgaaatcaagaagctcgcgtcgacgtacctgcgcaacccgcagacgatc
gaagtcgcgcgcagcaattcgacgaacgcgaacgtcacgcagatcgtctacgacgtcgcc
gaaggcgacaagcaggcggcggtcgtgcaactgctgcgcgatcgcggcctcaagcaggtg
atcgtattctgcaacagcaagatcggcgcgagccggctcgcgcgtcagctggaacgcgac
ggcgtggtcgcatcggctatccacggcgacaagtcgcagctcgagcggatgcaggcactc
gacgcattcaagcgcggcgagatcgaggcgctcgtcgcgaccgacgtggccgcgcgcggc
ctcgatatcgcggaactgccggccgtgatcaacttcgatctgccgttcaacgcggaagac
tacgtgcaccggatcggccgcacgggccgtgcgggcgcgaccggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcagctcgccgatatcgagaagctgatcaagcgtccgctc
gaggtgcagacgctcgtgctcgacaagccggcgcgccatcgtcatgacgagcgcggcggt
gaacgcggcggcgagcgcggcgggcggcgcgatcgcgacgagcatcgcggcgcgtcgggc
cgccgttcgcccggtgcggagcgtggccatcatcgccgccacgagccgccggtcgacgat
ttcttcctgaagccgtacgagccgtccgcgccgaccaagcaggccgaagacacgaagccg
gcgcagccggagaagaagacgccgaagcgtcaggttgccgcgttgctcggcgggttcggc
atgccgcgcaagccgaccagctga
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