Burkholderia multivorans DDS 15A-1: DM80_1058
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Entry
DM80_1058 CDS
T03292
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmk03016
]
DM80_1058
Enzymes [BR:
bmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DM80_1058
Transfer RNA biogenesis [BR:
bmk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DM80_1058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AIO76958
LinkDB
All DBs
Position
1:complement(1158270..1160342)
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AA seq
690 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAASELMQEADAA
AQQIDLDFLWECAPAEEFAYTALAEEYFGATYGPVERAALVLRLHGAPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPDAFAGKVLGLLTRPDKNSIEYKA
LEAAAGARGVSPARLMLDCGGIASARALHEARFLAEFFPHGTGFPPVTVGSLPDDLPRAD
VQAFSIDDITTTEIDDAFSVEHLSDGRVRVGVHIAAPALGIVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQDIVASETRAELVFVKSNLRHNT
LDELVTEESLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRTQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADHQRRMEYFWCLRWLAQEQKKQVVATVVKGDLVRLEEIPLLLHVPALG
VHARGTRVLLEVMALDELTIEASVRLLHVLDAPVVTSGDAADEDDEAGDDTLLDAQEASA
QTEAEALAESDDAAPGVDADAGASQQERAS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagttgcccggcgggcggcgcgcgaaagtgcgcgcgaaggac
gtgctgatcgaattcgagaagccggccgcgagcgagctgatgcaggaagccgatgcggcc
gcgcagcagatcgacctggatttcctgtgggaatgcgcgccggccgaggaattcgcctat
acggcgctcgccgaagagtacttcggtgcgacgtacggcccggtcgaacgcgcggcgctg
gtgctgcggctgcacggcgcgcccgtctacttccgccgcaaggggcgcggccagtatcag
cgcgcgcccgaagagcaactgaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgttcaggcccagtacgaagaggagctgaaggccggcaagctgccggacgcattc
gccggcaaggtgctcggcctgctgacgcgccccgacaagaactcgatcgaatacaaggcg
ctcgaggcggcggccggcgcgcgcggcgtgtcgcccgcgcggctgatgctcgattgcggc
gggatcgcgtcggcgcgcgcgctgcacgaagcgcgctttctcgctgaattcttcccgcac
ggcaccggctttccgcccgtcaccgtcggcagcctgcccgacgacctgccgcgcgcggac
gtgcaggcgttctcgatcgacgacatcacgacgaccgaaatcgacgacgcgttctcggtc
gagcatctgtccgacggccgcgtgcgcgtcggtgtgcacatcgccgcgccggcgctcggc
atcgtgcgcggcgacgcggtcgacgcgatcgcgcgggcgcgcctgtcgaccgtctatatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtcttcacgctgaaggag
ggcgactatcgcccggcgctgtcgctctacatcatcgtcaatcgcgagacgcaggacatc
gtcgcgagcgagacgcgcgccgagctcgtgttcgtgaagagcaacctgcgccacaacacg
ctcgacgaactcgtgaccgaagagtcgctcgcggccggcaccggcgactatccgcacaag
gacgacatcgcggtgctgtggccgctcgcgcaggcgctgttcgagaagcgtcaggtcgcg
cgcgccggttacgggctgaagcgcgaagtacagcgcaataccgactacaacttctacgtc
gaaggcgagcacgtgacgatcacgccgcgccgccgcggctcgccgctcgacctgatcgtg
tcggagctcgcgatcctcgcgaactcgacctggggtgcgttcctgcacgaccacacggtg
ccgggcatctaccggacgcagcgcggcttcggcgcgccgggcccgaagcgcacgcggatg
cagacgacggctgcgccgcacgaagggctcggcgtcgcgcagtatgcgtggagcacgtcg
ccgctgcgccgctacgtcgacctcgtcaaccagtggcagctgctcgcctgcgtgcagcat
ggcgtgaccgcgaagctcgccgcgccgttcaagccgaaggacgccgatctgtacgcggtc
gtgcagggattcgacgatacgtacacggcctacgccgaccatcaacgccggatggagtat
ttctggtgcctgcgctggctcgcgcaggagcagaagaagcaggtcgtcgcgaccgtcgtg
aagggcgatctcgtgcgtctcgaggaaatcccgctgttgctgcacgtgccggcgctcggc
gtccatgcgcgcggcacgcgcgtgctgctcgaggtgatggcgctcgacgagctgacgatc
gaggcgtcggtgcggctgttgcacgtgctcgacgcgccggtcgtcacgagcggcgacgcg
gccgacgaggacgacgaagccggcgacgacacgctgctcgacgcgcaggaagcgtccgcg
cagaccgaggccgaagcgctggccgaatcggatgacgccgcgccgggcgtcgatgccgac
gcaggcgcgtcgcagcaggagcgcgcatcgtga
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