Burkholderia multivorans DDS 15A-1: DM80_1271
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Entry
DM80_1271 CDS
T03292
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmk03016
]
DM80_1271
Enzymes [BR:
bmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DM80_1271
Transfer RNA biogenesis [BR:
bmk03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DM80_1271
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AIO76439
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All DBs
Position
1:complement(1386574..1387158)
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AA seq
194 aa
AA seq
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MNGDRLRVFVALMPDAASRDALHALPVTRGARRTFAAQLHVTLAFIGAIERDRCDALAAR
LPVLAAAHPLPPQPVERIAWWPSLPRARLIVAELAREPACAALNAALAASLAELGLPADP
RPFRPHVTLARLPRDAVGQPAHGGAPGRPVALRFDTLTLFESRLSHEGVSHRPIVSAPIA
CLEHRGPGEPGERT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgaccggctgcgcgtgttcgtcgcgctgatgcccgatgcggcatcgcgcgat
gcgctgcacgcgttgccggtcacacgcggcgcgcggcgcacgttcgccgcgcaattgcac
gtgacgctggcgttcatcggcgcgatcgagcgcgatcgatgcgacgcactcgcggcgcgt
ctgccggtgctggccgccgcgcatccgctgccgccgcagccggtcgagcgcatcgcgtgg
tggccgagcctgccgcgggcgcggctgatcgtcgccgaactcgcgcgcgagcccgcctgt
gcggcgctgaacgcggcgctggcggcgtcgctcgccgaactcggcctgccggccgatccg
cgtccgttccggccgcacgtgacgctcgcgcgattgccgcgcgatgcggtcgggcagccc
gcgcacggcggcgcgccggggcggccggtcgcgctgcgcttcgatacgctgacgctgttc
gaaagccggctgtcgcacgaaggcgtatcgcatcggccgatcgtgtcggcgccgatcgcg
tgcctcgagcaccgcgggcccggcgagcccggcgagcggacctaa
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