Burkholderia multivorans DDS 15A-1: DM80_1335
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Entry
DM80_1335 CDS
T03292
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM80_1335 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmk03019
]
DM80_1335 (recQ)
03400 DNA repair and recombination proteins [BR:
bmk03400
]
DM80_1335 (recQ)
Enzymes [BR:
bmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM80_1335 (recQ)
Messenger RNA biogenesis [BR:
bmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM80_1335 (recQ)
DNA repair and recombination proteins [BR:
bmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM80_1335 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
SaeA_1st
Motif
Other DBs
NCBI-ProteinID:
AIO76113
LinkDB
All DBs
Position
1:complement(1443196..1445043)
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AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYSAFRGQQGEIVEHVASGGDCLVLMPTGGGKSLCYQIPALMRREAGH
GAGIVVSPLIALMQDQVAALREVGVRAAYLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLELLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPTVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGIRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCLEPPASWDATREAQMA
LSCVFRAQRASGFNFGASHLIEILRGARTEKVLQRGHDQLSTFGIGAALSEPEWRAIFRQ
LVAYGYLAVDHGGFGALVLTEAAKPVLKGDEKVTLRRYVKPQRTRQSSGRSGTRVDPTAG
MGARERARWDALRAWRAETAKADGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcgccctcgaaatcctcgacgaagtcttcggttattccgcctttcgcggccag
cagggcgagatcgtcgagcacgtcgcgagcggcggcgactgtctggtgctgatgccgacg
ggcggcggcaagtcgctgtgctaccagattcccgcgctgatgcgccgcgaggccggccat
ggcgcgggcatcgtcgtgtcgccgctgatcgcgctgatgcaggatcaggtcgccgcgctg
cgcgaagtcggcgtgcgcgccgcgtacctgaactcgacgctgtcgggcgccgaggccgcg
gcgaccgagcgcgcgctgcgcgaaggcgagatcgatctgctgtatgtcgcgcccgaacgg
ctgatgacggggcgttttctcgagctgctcgaacgcgcgaagatcgggctgttcgctatc
gacgaggcgcactgcgtgtcgcagtgggggcacgacttccgcccggaatacatccagctg
tcggtgctgcacgagcggttcccgacggtgccgcgcatcgcgctgacggcgactgccgat
gcgatcacgcgcgacgaaatcattcaccgtctcgcgctcgacgacgcgcgcgtattcgtg
tcgagcttcgatcggccgaacatccgctatcggatcgtcgagaaggacaatgcgcgcgcg
cagttgctcgatttcatccgcgccgaacacacgaatgccgacggcacgaccgacgccggc
gtcgtctattgcctgtcgcgccgcaaggtcgaggaaacggccgagtggctgaaggcgcag
ggcatccgcgcgctgccttatcacgccggcatggaattcgaagtgcggcagaagcatcag
gagatgttccagcgcgaggaaggcatcgtgatgtgcgcgacgatcgcgttcgggatgggc
atcgacaagcccgacgtgcgcttcgtcgcgcacctcgatctgccgaagagcgtcgaaggc
tattaccaggagacggggcgcgcagggcgcgacgggctgccggcgaacgcgtggatggcg
tacgggctcggcgacgtcgtccagcagcgcaagatgatcgacgagtccgatgccgacgac
gcgcacaagcgcgtgcagacctcgaagctcgatgcgctgctcggcctgtgcgagacgatc
tcgtgtcgccgcgtgcggctgctcaactatttcggcgaggcgagccagccctgcggcaac
tgcgacacgtgcctcgagccgcccgcatcgtgggacgcgacgcgcgaagcgcaaatggcg
ctgtcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaacttcggcgcgagccacctg
atcgagatcctgcgcggcgcgcgtaccgaaaaggtgctacagcgcgggcacgaccaactc
agtacgttcgggatcggcgcggcgctgtcggagcccgagtggcgcgcgattttccggcag
ctcgtcgcgtacggctatctcgcggtcgatcacggcggattcggcgcgctcgtgctgacc
gaagccgcgaagcccgtgctgaagggcgacgagaaggtcacgctgcgacgctacgtgaag
ccgcagcgcacgcgccagtcgtccggccgcagcggcacgcgcgtcgatccgacggccggc
atgggcgcacgcgagcgcgcgcgctgggacgcgctacgcgcatggcgcgcggagacggcg
aaggccgacggcgtgccggcctacgtgatcttccacgacgcgacgctcgccgagatcgcg
cgcaatgcaccggagacgatcgacgatctccgccatatccccggcatgggcgtgcgcaag
ctcgagcggttcggcgacgagatcatcgacgtcgtcgaatcggcctga
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