Burkholderia multivorans DDS 15A-1: DM80_1337
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Entry
DM80_1337 CDS
T03292
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DM80_1337 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmk03021
]
DM80_1337 (rpoB)
03400 DNA repair and recombination proteins [BR:
bmk03400
]
DM80_1337 (rpoB)
Enzymes [BR:
bmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DM80_1337 (rpoB)
Transcription machinery [BR:
bmk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DM80_1337 (rpoB)
DNA repair and recombination proteins [BR:
bmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DM80_1337 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
UbiD
BSH_YknX
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AIO76710
UniProt:
A0A1B4TTK3
LinkDB
All DBs
Position
1:complement(1449536..1453642)
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AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRPIVHQVPFLLATQLESFSTFLQADVPATQRKPEGLQAAFTSV
FPIVSHNGFARLEFVSYALSAPAFNIKECQQRGLTYCSALRAKVRLVILDKESPNKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDE
GAQLEFVPERLRGEVARFDITDRDGKVIVQKDKRINAKHIRDLEAAKTKFISVPEDYLLG
RVLAKNVVDGETGEVIANANDEITESVLEKLREAGIKEIQTLYTNDLDQGPYISSTLRVD
ETTDKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEEAYDLSKVGRMKFNRRVGRDEI
TGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDGKVTDQIDYLSAIEEGRYMIAQANAAIDDEGRLTDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTCAVDSGT
TVQAFRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMG
DKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIR
LADDEAAAQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLQRQAKIEELRAFLTKIYNESGRAEDLDSFSDDEILELAKNLREGVPFAT
PVFDGATEDEMAKMLDLAFPDDIAKQLDMNPSKNQVRLYDGRTGEPFERRVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgcattcgcaagagtttcgcgaagcgccccatc
gttcaccaagttcctttcctgctggccacccagcttgaatcattcagcacgtttctgcaa
gccgatgtgccggcgacgcaacgcaagcctgaaggtttgcaggccgctttcacatcggta
tttcccattgtttcgcacaacggcttcgcgcgcctcgagttcgtgagctatgcgctgtcc
gcgccggcattcaacatcaaggaatgccagcagcgcggcctgacgtactgctccgcgctg
cgcgcgaaggtccgcctcgtcatcctcgacaaggaatcgccgaacaagcccgtcgtcaag
gaagtgaaggagcaggaagtgtacatgggcgaaattccgctcatgacgccgaccggctcg
ttcgtcatcaacggcaccgagcgtgtcatcgtctcgcagctgcaccgttcgccgggcgtg
ttcttcgaacacgacaagggcaagacgcacagctcgggcaagctgctgttctcggcacgg
atcattccgtaccgcggctcgtggctcgacttcgaattcgatccgaaggacatcctgtac
ttccgcgtcgaccgtcgccgcaagatgccggtcacgatcctgctgaaggcgatcggcctc
acgccggaacagatcctcgcgaacttcttcgtgttcgacaacttcacgttgatggacgaa
ggtgcgcagctcgagttcgtgcccgagcgcctgcgcggcgaagtcgcgcgcttcgacatc
acggatcgcgacggcaaggtcatcgtccagaaggacaagcggatcaacgcgaagcacatc
cgcgacctcgaagccgcgaagacgaagttcatctcggtgccggaagactatctgctcggc
cgcgtgctggcgaagaacgtcgtcgacggcgagacgggcgaagtgatcgcgaacgcgaac
gacgagatcaccgaaagcgtgctcgagaagctgcgcgaagcgggcatcaaggaaatccag
acgctctacacgaacgatctggaccagggtccgtacatctcgtcgaccctgcgtgtcgac
gaaacgaccgacaagacggccgcgcgcatcgcgatctaccgcatgatgcgtccgggcgag
ccgccgaccgaagaagcggtcgaggcgctgttcaaccgtctgttctacagcgaagaagcg
tacgacctgtcgaaggtcggccgcatgaagttcaaccgccgcgtcggccgtgacgaaatc
acgggcccgatgacgctgcaggacgacgacatcctcgcgacgatcaagatcctcgtcgag
ctgcgcaacggcaagggcgaagtggacgacatcgaccacctcggcaaccgtcgcgtgcgt
tgcgtcggcgaactggcggaaaaccagttccgcgcgggtctcgtgcgcgtcgagcgcgcg
gtcaaggaacgccttggccaggccgaaagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgatccgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgcgtttccgcactgggc
ccgggcggtctgacgcgcgagcgtgcaggcttcgaagtccgcgacgtgcacccgacccac
tacggccgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggtctgatcaactcg
cttgcactgtacgcgcacctgaacgagtacggcttcctcgagacgccgtaccgcaaggtc
gtggacggcaaggtcaccgatcagatcgactatctgtcggcgatcgaggaaggccgttac
atgatcgcgcaggcgaacgcggcgatcgacgacgaaggccgactgaccgacgaactcgtg
tcgtcgcgtgaagccggcgaaacgatgatggtcacgccggaccgcatccagtacatggac
gtggcgccgtcgcagatcgtgtcggttgcggcatcgctgattccgttcctcgagcacgac
gacgcgaaccgtgcactgatgggctcgaacatgcagcgtcaggccgtgccgtgtctgcgt
ccggagaagccggtcgtcggtacgggcatcgagcgtacctgcgcggtcgactcgggcacg
acggttcaggcgttccgcggcggtgtcgtcgactacgtcgacgcaggccgtatcgtgatt
cgcgtgaacgacgacgaagcggtcgcaggtgaagtcggcgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatcgtgaagatgggc
gacaaggtctcgcgcggcgacgtgctggccgacggcgcctcgacggacctgggcgagctc
gcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaggat
tcgatcctgatctcggagaaggtcgtggccgacgatcgctacacgtcgatccacatcgaa
gagctgaacgtcgttgcacgcgacacgaagctcgggccggaagaaatcacgcgcgacatc
tcgaacctggcggaagtccagctcggccgtctcgacgaatcgggcatcgtctacatcggt
gcggaagtcgaagcgggcgacgtgctggtcggcaaggtcacgccgaagggcgagacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggcaccgtgatcgacgtccaggtgttc
acgcgtgaaggcatccagcgcgacaagcgtgcgcaacagatcatcgacgacgaactgaag
cgctaccgtctcgacctgaacgaccagctgcgcatcgtggaaggcgacgcgttccagcgt
ctcgcccgcatgctggtgggcaaggtcgcgaacggcggtccgaagaagctcgcgaagggc
acgaagatcgaccaggcttacctggaagatctcgaccactaccactggttcgacatccgc
ctcgcggacgacgaagcagcggcgcagctcgaagcgatcaagaactcgatcgaagagaag
cgtcaccagttcgatctggcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctggcggtgaagcgccgtctgcag
cctggcgacaagatggcaggccgtcacggcaacaagggtgtcgtgtcgaagatcgtgccg
atcgaagacatgccgtacatggccgatggccgtccggcagacgtcgtgctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggttctggaagtgcacctcggctgggccgcg
aagggcctcggctggcgtatcggcgaaatgctgcagcgtcaggcgaagatcgaagagctg
cgtgcgttcctgacgaagatctacaacgagtcgggtcgcgcggaagatctggacagcttc
tccgacgacgagatcctcgaactcgcgaagaacctgcgcgaaggcgtgccgttcgcgacg
ccggtgttcgacggtgcgaccgaggacgaaatggcgaagatgctcgacctcgcgttcccg
gacgacatcgcgaagcagctcgacatgaacccgtcgaagaatcaggtccgcctgtacgac
ggtcgcacgggcgagccgttcgagcgccgcgtgacggtcggctacatgcactacctgaag
ctgcaccacctggtcgacgacaagatgcacgcgcgttcgacgggcccgtactcgctcgtc
acgcagcagccgctgggtggtaaggcgcagttcggtggtcagcgtttcggtgaaatggaa
gtgtgggcactcgaggcatacggcgcgtcctacgtgctgcaggaaatgctgacggtgaag
tcggacgacgtgacgggccggaccaaggtgtacgagaacctggtcaagggcgatcacgtg
atcgatgcaggcatgccggaatccttcaacgtgctggtgaaggaaatccgctcgctcggt
atcgatatcgatctcgaccgcaattaa
DBGET
integrated database retrieval system
