Burkholderia multivorans DDS 15A-1: DM80_2248
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Entry
DM80_2248 CDS
T03292
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM80_2248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmk03019
]
DM80_2248
Enzymes [BR:
bmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DM80_2248
Messenger RNA biogenesis [BR:
bmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM80_2248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
Ric8
DegT_DnrJ_EryC1
Cas3-like_C_2
Sacchrp_dh_NADP
ERCC3_RAD25_C
AAA_22
CARD_2
Motif
Other DBs
NCBI-ProteinID:
AIO77341
LinkDB
All DBs
Position
1:complement(2427926..2429368)
Genome browser
AA seq
480 aa
AA seq
DB search
MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYTEHRSAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP
RRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAETVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNNTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPREVIAGFEPDPNAKPEPIQQRRGQQPRGGGGHGGGGGGNRAPRAGGAAQQ
PGAKRDGQAPKPKAAAKPRPQGGGNGNGARPSGGNGARAANGNAAHPNRNRSSRSGQRGH
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatctctcggcctggccgaaccgctcgtcaaggcggtcaacgagctcggc
tacacgtcgccgaccccgatccagcagcaggccattcctgcggtcctcggcggcggcgat
ctgctcgccggcgcgcagaccggcaccggcaaaaccgcaggcttcacgctgccgatcctg
cagcgcctgcacaccttctacaccgagcatcgcagcgcaaagcgcgccgtgcgcgcactg
atcctcacgccgacgcgcgaactcgccgcccaggtcgaggaaagcgtgcgtgcgtacagc
aagtatctgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gatgcgctcaagcgcggcgtcgacatcgtcgtcgcgacgccgggccgcctgctcgatcac
atgcagcaaaagacgatcgacctgtcggatctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccgccg
cggcgccagaacctgctcttctccgcgacgttctccgacgagatcaaggcgctcgccgac
agcctgctcgattcgccggcgctgatcgaggtcgcgcgccgcaacacgaccgccgagacg
gtcgcgcagaagatccatccggtcgaccgcgatcgcaagcgcgaactgctcacgcatctg
atccgcgagcacaactggttccaggtgctcgtcttcacgcgcacgaagcacggcgcgaac
cggctcgccgaacagctgaccaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctcgccgagttcaagaacaacacgctgcaggtgctc
gtcgcaaccgacatcgccgcgcgcgggatcgacatcgatcagttgccgcacgtcgtcaac
ttcgatctgccgaacgtgcccgaggattacgtgcaccgcatcggccgcacgggtcgcgcg
ggcgcgaccggcgaagccgtgtcgctcgtgtgcgtcgacgagaagcagttgctgcgcgac
atcgaacggctgatcaagcgcgagattccgcgtgaagtgatcgcgggcttcgagcccgat
ccgaatgcgaagcccgaaccgatccagcagcgtcgcggccagcagccgcgcggcggtggc
ggccatggcggcggcggtggcggcaatcgtgcgccgcgcgccggtggcgccgcccagcag
ccgggcgcgaagcgcgacggccaggcaccgaagccgaaggcggccgccaagccgcgcccg
cagggcggcggcaacggcaacggcgcgcgcccgtcaggcggcaacggcgcacgtgccgca
aacggcaacgccgcgcacccgaaccgcaatcgttcgtcgcgcagcggccagcgcggtcac
tga
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