Burkholderia multivorans DDS 15A-1: DM80_2420
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Entry
DM80_2420 CDS
T03292
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DM80_2420 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmk03400
]
DM80_2420 (xseA)
Enzymes [BR:
bmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DM80_2420 (xseA)
DNA repair and recombination proteins [BR:
bmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DM80_2420 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
NusB
DHQ_synthase
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AIO75497
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All DBs
Position
1:2600552..2601934
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AA seq
460 aa
AA seq
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MLSDSPFAAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFTRAASGHWYFS
IKDQQAQMRCVMFRGRAQYAEFMPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRL
YEAFLRLKAQLEAEGLFAPERERPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVI
VYPAPVQGAGAAEKLVAAVQTANARREVDVLLVCRGGGSIEDLWSFNDEALARAIAASEL
PVVCGVGHETDFTIADFAADVRAPTPTGAAELASPQRALLLRELAERERALARALARGLE
QRAQQLDWLARRLVSPAERLQRQRAHVGQLAVRLATAAARPVRDARARFALAQLRWQRAR
PDPAHARHVLAGLSQRLAVALQRRHERDTARVAACAARLEVLSPQRTLERGYAALIDAQT
GRAVRAPSALKPQRRLTVHLAEGSADVSLADVQPRLTDTI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgactctccttttgccgcacccggcgcgacgcgcggcggcgacgaagtgatt
cccgtttcggcgctgaaccgcgcgatttcgacgatgctcgaacgctcgttcccgctgctg
tggatctcgggcgaagtatcgaacttcacgcgcgcggcgagcggtcactggtatttctcg
atcaaggatcagcaggcgcagatgcgctgcgtgatgttccgcggccgcgcgcaatacgcg
gagttcatgccgcgcgaaggcgaccgcatcgaagtgcgcgcggtcgtcacgatgtacgag
ccgcgcggcgaggtgcagctgaatgtcgaggccgtgcggcgcaccggacaggggcggctc
tacgaggcgttcctgcggctgaaggcgcagctcgaggccgaagggctgttcgcgcccgag
cgcgagcggccgctgcccgcgcacccgcgcgcgatcggcatcgtcacgtcgctgcaggcc
gccgcgctgcgcgacgtgctgaccacgctcgcgcgtcgcgcgccgcatgtccccgtgatc
gtatatcctgcgcccgtgcagggtgcgggcgcggcggagaagctcgtcgccgccgtgcaa
acggcgaacgcgcggcgcgaggtcgacgtgctgctcgtctgtcgcggcggcggctcgatc
gaagatctgtggtcgttcaacgacgaagcgctcgcgcgcgcgattgcggcgagcgaactg
ccggtcgtctgcggtgtcgggcacgaaaccgatttcacgatcgccgatttcgcggccgac
gtgcgcgcgccgacgccgaccggcgcggccgagctcgcgagcccgcagcgcgcgctgctg
ctgcgcgaactggccgagcgcgaacgggcgcttgcgcgcgcactggcgcgcggcctcgag
cagcgcgcgcagcagctcgactggctcgcgcgccggctcgtgagcccggccgaacggctg
cagcggcaacgtgcgcacgtcggccagctcgcggtgcggctcgcgaccgcggccgcgcgc
ccggtgcgcgacgcacgcgcacggtttgcgctcgcgcagctgcgctggcagcgcgcgcgc
cccgatcccgcgcatgcgcgccacgtgctggccgggttgtcgcagcgtctcgcggttgcg
ctgcagcgccgtcacgagcgcgataccgcgcgcgtcgccgcatgcgcggcacggctcgag
gtgctgagcccgcaacgcacgctcgagcgcggttacgcggcgctgatcgatgcgcagacg
ggccgcgcggtgcgcgcgccgagcgcgctgaaaccgcagcgccggctgaccgtgcatctc
gccgaaggctcggccgacgtgtcgctggccgacgtgcagccgcggctgaccgatacgatc
tga
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