Burkholderia multivorans DDS 15A-1: DM80_3198
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Entry
DM80_3198 CDS
T03292
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM80_3198 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmk03021
]
DM80_3198 (rho)
03019 Messenger RNA biogenesis [BR:
bmk03019
]
DM80_3198 (rho)
Transcription machinery [BR:
bmk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DM80_3198 (rho)
Messenger RNA biogenesis [BR:
bmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DM80_3198 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIO75981
UniProt:
A0A1B4MTK7
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All DBs
Position
1:complement(3434438..3435700)
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AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPDILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaactgatcgaaatggccaacggc
ctcgagatcgaaaacgcgaaccgcctgcgcaagcaggagctgatgttcgccattctcaaa
aagcgcgccaagacgggagagacgatcttcggcgacggcacgctcgaagtgctgccggac
ggcttcggcttcctccgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctac
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacacgatcgaaggcgaa
gtacgcacgccgaaggacggcgagcgctacttcgcgctcgtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgagcgcgaaatgcgcggcgaggaaaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctcgtcgcatcgccg
aagtcgggcaagaccgtgatgcttcagcacatcgcgcatgcgatcaagcagaaccatccg
gacgtgatcctgttcgtgctgctgatcgacgagcgccccgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcgtcgacgttcgacgaaccggccacgcgtcacgtg
caggtcgccgaaatggtaatcgagaaggccaagcgtctcgtcgaaatgaagcatgacgtc
gtgatcctgctcgattcgatcacgcgtctcgcacgcgcctacaacaccgtgatcccggcg
tcgggcaaggtgctgacgggcggtgtcgacgcgaatgcgctgcagcgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtcatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtctatccgtcgatcaacctg
aacaagtcgggcacgcgccgcgaggaaatgctgatcaagccggacatccttcagaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggcgatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgatctgatgcgccgcggcggc
taa
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