Burkholderia multivorans DDS 15A-1: DM80_3407
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Entry
DM80_3407 CDS
T03292
Name
(GenBank) DEAD_2 family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DM80_3407
09124 Replication and repair
03420 Nucleotide excision repair
DM80_3407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmk03021
]
DM80_3407
03036 Chromosome and associated proteins [BR:
bmk03036
]
DM80_3407
03400 DNA repair and recombination proteins [BR:
bmk03400
]
DM80_3407
Enzymes [BR:
bmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DM80_3407
Transcription machinery [BR:
bmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DM80_3407
Chromosome and associated proteins [BR:
bmk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DM80_3407
DNA repair and recombination proteins [BR:
bmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DM80_3407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
GlgS
YgxA-like_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AIO73377
LinkDB
All DBs
Position
2:complement(71612..73912)
Genome browser
AA seq
766 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSKRGARYETEIALTGTWGV
LTVRGRADGYDPVSNRIEEIKTYRGSLDAMPANHRALHWAQAKVYGHLMCAARGLAQIDV
ALVYFDIVSERETVLTETLSAGTLAAFFAEQCACFVGWAERETAHRSARDAALRALAFPH
AQFRSGQRELAVAVYRAARDERCLIAQAPTGIGKTLGTVFPLLKACGEGEIDHVFFLTAK
TPGRALALEAATTLGAGTPALPLRVLELVARDKACEHPDLACHGDACPLARGFYDRLPAA
RDAAIDAGLLDRDTVRAAALAHDVCPYYLAQELARWSDMVIGDYNYYYDGSAMLYTLAQQ
NQWRIGVLVDEAHNLLDRARKMYSASLDPFAFAAARDAAPAPLRKAFDRLARAWGTLNRA
QTARYAAYPQIPGPIVSAVQNLVAAVGEYLADAPRANGDALLRFHFDAIQFGVLADAFDS
ASIFDATLHGEPVPRQPALDGVVPAGRRRRVQSTLCVRNVIPAGFLAPRYDAARATVLFS
GTLSPFHFYRDTLGLPADTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYAARPGNYLGFLSSFDYLQRVVVLMQARHPDVPVWAQAPGMAESERDAFLARFDAGGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDARFGNGYDYMYLY
PGLQKVVQAAGRVIRTERDEGVVHLIDDRYRRREVRNLLPRWWRIG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
gtgagctatgtcgtcgcggtgcgggcgatgtgcgagttcaccgcgcggcgcggcgatctc
gacctgcgcttcacgcccgcgccgaccgcgctcgaaggcatcgccggccacggcgcggtc
acgtcgaagcgcggcgcccgctacgaaaccgagatcgcgctgaccggcacgtggggcgtg
ctgaccgtgcgcggccgcgcggacggctacgatccggtgtcgaaccggatcgaggaaatc
aagacctatcgcggcagcctcgacgcgatgcccgcgaaccatcgcgcgctgcactgggcg
caggcgaaggtgtacgggcatctgatgtgcgcggcgcgcggcctcgcgcagatcgacgtc
gcgctcgtctatttcgatatcgtctccgagcgcgagaccgtgctgaccgaaacgctgagc
gcaggcacgctcgccgcgtttttcgccgagcagtgcgcgtgcttcgtcggctgggccgag
cgcgagaccgcgcatcgcagcgcgcgcgatgcggcgctgcgtgcgctcgcgtttccgcat
gcgcagtttcggagcgggcagcgcgagcttgccgtggccgtctatcgcgccgcgcgcgac
gaacgctgcctgatcgcgcaggcgccgaccggcatcggcaagacgctcggcaccgtgttt
cctttgctgaaagcatgcggcgaaggcgaaatcgatcatgtgttcttcctgaccgcgaag
acgcccggacgcgcgctcgcgctcgaggccgcgacgacgctcggcgccggcacgcccgca
ctgccgctgcgcgtgctcgaactcgtcgcacgcgacaaggcgtgcgagcatcccgacctc
gcgtgccacggcgacgcgtgtccgctcgcgcgcggcttctacgaccggctgccggccgcg
cgcgacgcggcgatcgacgcggggctgctcgatcgcgatacggtgcgcgcggccgcgctc
gcacacgacgtgtgtccgtactacctcgcgcaggagctcgcgcgctggtccgacatggtg
atcggcgactacaactactactacgacggcagcgcgatgttgtacacgctcgcgcagcag
aaccagtggcgcatcggcgtgctcgtcgacgaggcgcataacttgctcgatcgcgcgcgc
aagatgtacagcgcgtcgctggacccattcgcgttcgccgccgcgcgcgacgcggcgccg
gcgccgctgcgcaaggcattcgaccggctggcgcgtgcgtggggcacgctcaatcgcgcg
cagaccgcgcgttacgccgcgtatccgcagattccggggccgatcgtgtcggccgtgcag
aatctcgtcgccgcggtcggcgagtatctggcggacgcgccgcgcgcgaacggcgacgca
ttgctgcgctttcatttcgacgcgatccagttcggcgtgctcgccgacgcgttcgacagt
gcgtcgatcttcgacgcgacgctgcacggcgaaccagtcccgcgtcagccggcgctcgac
ggcgtcgtgccggccggccgccggcgccgcgtgcagtcgacgctgtgcgtgcgcaacgtg
atccccgccggcttcctcgcgccgcgctacgacgccgcgcgtgcgaccgtgctgttctcg
ggcacgctcagcccgttccatttctatcgcgacacgctcgggctgccggccgataccggg
tggctcgacgtcgacgggccgttccgcgcggagcagctgaccgtgcgcgtcgcgagccac
gtgtcgacgcgctggcgcgaccgcgaccggtcgctcgagccgatcgccgacctgatcgcc
gcgcagtatgcggcgcgtcccggcaactatctcggctttctgagcagcttcgactatctg
cagcgcgtggtcgtgctgatgcaggcgcggcatccggacgtgcccgtgtgggcgcaggcg
cccggcatggccgagagcgagcgcgacgcgtttctggcgcgcttcgatgccggcggccgc
ggcgtcggcttcgcggtgctcggcggcgcgttttcggaaggggtggatctcgtcggcgaa
cggctgatcggcgcgttcatcgcgacgctcggactgccgcaggtcaacgacgtcaacgag
caaatgcggcgtgcgatggacgcccgtttcggcaacggctacgactacatgtatctgtat
ccggggctgcagaaggtcgtgcaggcggcagggcgcgtgattcgcactgaacgggacgaa
ggcgtcgtgcatctgatcgacgaccgctatcgacgacgcgaggtgcgcaacctgctgccg
cgctggtggcggatcggctga
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integrated database retrieval system
