Burkholderia multivorans DDS 15A-1: DM80_3754
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Entry
DM80_3754 CDS
T03292
Name
(GenBank) ATP-dependent DNA helicase, RecQ family protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM80_3754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmk03019
]
DM80_3754
03400 DNA repair and recombination proteins [BR:
bmk03400
]
DM80_3754
Enzymes [BR:
bmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM80_3754
Messenger RNA biogenesis [BR:
bmk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM80_3754
DNA repair and recombination proteins [BR:
bmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM80_3754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
ResIII
Phage_Gene47
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIO73031
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All DBs
Position
2:475696..477519
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AA seq
607 aa
AA seq
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MTLDTRLRDLRRTMRERFGIGRLRGGQEAIIRSVLARRDTLATMPSGAGKSLCYQLPALH
LNGVTLVVSPLISLMKDQADKLHALGIECLLLNSTVKRKDEQSALQALRDGRTRIVFVTP
ERLAQPAFVDVLAGGTRVPVQLVVVDEAHCVSKWGHDFRPAFLDIAHAVDTIGGPPVLAL
TATATPEVVDDIVHALRLRDPTIVRTGTYRPNLHYRVVHTGGGHGRREAARALELKQQRL
LDLIGELQGAGIVYVATVRDVQRVWAWLAASGESVARYHGRMPARERRDEQDRFMNGDAR
LIVATNAFGMGIDKPDVRFVIHYQIPANLDAYYQETGRAGRDGEAANCVLLFDLNDRRIQ
QFFLAGKYPDAALVLQVFDAIAAATGDAQQEAASPSAGPARTPLSGKALAEKLTDVPSGK
LDVALAMLIDARIIQRDRQHRYRLRKGAAPAQLRDAIPAAAEQFQQMRERDRKALQQMID
YAQSGRCRWRLMLEYYEEDTKIERCGTCDNCLHPPHVEPLPEVHSPAAIARRRAERVAEQ
TRGWSRGEKARVARFGVGEVVMATDEQVAILFPDGNVRTFVADRVRHVRDAEPRNRNVGS
TSAREDT
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacgttggatacacggctgcgcgacctgcgcaggacgatgcgcgagcgattcgggatc
ggccgcctgcgcggcggacaggaggcgatcatccgcagcgtgcttgcgcggcgcgatacg
ctcgccacgatgccttccggcgccggcaagtcgctctgctaccagttgccggccctgcat
ctgaacggcgtgacgctcgtcgtttcgccgctgatctcgctgatgaaggatcaggccgac
aagctgcatgcgctcggcatcgagtgcttgctgttgaacagcacggtcaagcgcaaggac
gagcaatcggcgttgcaggcgttgcgcgatggccgcacgcggatcgtcttcgtgacgccc
gaacgactcgcgcagcccgcgttcgtcgacgtgctggcgggcggtacgcgcgtgccggtc
caactcgtcgtcgtggacgaagcgcactgtgtctcgaagtggggccacgatttcaggccg
gcctttctcgacatcgcgcatgccgtcgacacgatcggcggcccgcccgtcctggcgctc
acggccaccgcgacgcccgaggtcgtcgacgacatcgtgcacgcactgcggctgcgcgac
cccacgatcgtgcgtaccgggacgtaccggccgaacctgcactaccgcgtcgttcatacg
ggcggcggacacggacgccgcgaagccgcgcgcgcgctcgaactcaagcagcagcgcctg
ctcgatctgatcggcgaactgcagggcgcgggcatcgtctatgtcgcgaccgtgcgcgac
gtgcaacgcgtatgggcgtggctggcggcgagcggcgaaagcgtcgcgcgctaccacggg
cgaatgccggccagagaacgccgtgacgagcaagaccgcttcatgaacggcgacgcgcgc
ctcatcgtcgcgacgaacgcgttcggcatgggcatcgacaagccggacgtccgcttcgtc
atccactaccagatccccgccaatctggacgcgtattaccaggaaaccgggcgcgccggg
cgcgacggcgaagctgccaattgcgtgctgctgttcgacctcaacgatcgccgcatccag
cagttcttcctcgccgggaagtatcccgatgccgcactggtattgcaggtgttcgatgcg
atcgcggcagcgaccggcgacgcgcagcaggaagccgcgtcgccctcggctggaccggca
cgcacgccgctgtcggggaaagcgctcgcggaaaagctgacggacgttccgtccggcaag
ctcgacgtcgcgctcgcgatgctgatcgacgcacgcatcattcagcgcgaccgccagcat
cgctaccggttgcgcaagggcgcggcgccggcgcaactgcgcgacgcgattccggcggcc
gcagagcaattccagcagatgcgcgaacgcgatcgcaaggcattgcagcagatgatcgat
tacgcgcaaagcggacgctgccgctggcgactgatgctcgagtactacgaggaagacacg
aagatcgaacgctgcggcacctgcgacaactgcctgcatccgccgcatgtcgagccgcta
ccggaagtgcattcgccggccgcgatcgcgcgccgccgcgccgagcgcgtggccgagcag
acgcgcggatggtcccgtggagagaaagcgcgcgtcgcgcgattcggtgtgggcgaggtc
gtcatggcgaccgacgagcaggtcgcgatcctgtttcccgatggcaacgtgcgcacgttc
gttgcggaccgcgtgcgacacgtgcgcgatgccgagccgcgcaatcgcaacgtgggaagc
acatcggcacgtgaggacacatag
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