Burkholderia multivorans DDS 15A-1: DM80_420
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Entry
DM80_420 CDS
T03292
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM80_420 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmk03400
]
DM80_420 (recD)
Enzymes [BR:
bmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DM80_420 (recD)
DNA repair and recombination proteins [BR:
bmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM80_420 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
RecD_N
SLFN-g3_helicase
AAA_22
DEAD
AAA_25
MukB
CbiA
Motif
Other DBs
NCBI-ProteinID:
AIO77043
LinkDB
All DBs
Position
1:complement(481076..483394)
Genome browser
AA seq
772 aa
AA seq
DB search
MNVSDDTLEFTGGLVARLPEPADFGIALAEGFARRIGDLARRAGAPAEAARWAARAAFAT
SRATAAGHVCVSLGALAQRYEATLDDVRAALAASGVVAFGTLLRGDERPLIVDRHDHLYL
SRYFDYERRLADALVAQAGVARADDALSPERLRENLTRYFGPATGEVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDVHPALRVALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGASGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPTFTAAARMRISQALGIDEAAFAAALPVPDDEA
SENGATSAASAAPPVAPPPTSPAAAARKTTRKRTVDVRQASLFDDEPYDEGATAADSDSS
PRSSTDATNATNATDPHDDAPAWIEGDELAWLDAAVLPPADANAVALASTPAAAASARIE
ATAPSPAASAHASAPLADCVVWLERNYRFGLDSPIGRLSLAIRRGDVQAALDALPADDAA
AASFYEDVGDTLAAATIDRLARRFDAYLDALRTALAAPTPDPLPLFDALNRFRILCATRN
GSRGAEHVNALVAAQVRRAARVPLAVGAHWFTGRPIMVTRNDYALGLFNGDIGIALPDAN
GVLRVWFRRADDTARAVSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGRVLTREL
VYTAVTRARARVQVIGSRHVLAQAVAARTQRDSGLSARVDEALARRRAEATR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtccgacgatacgctcgaattcaccggcggccttgtcgcgcggctgcccgag
ccggcggacttcggcatcgcgctcgcggagggcttcgcgcgccggatcggcgatctcgcg
cggcgcgcgggcgcaccggccgaggccgcgcgctgggccgcacgcgcggccttcgcgacg
agccgcgcgacggcggccggtcacgtctgtgtgtcgctcggcgcgctcgcgcagcgttac
gaggcgacgctcgacgacgtgcgcgcggcgctcgcggcaagcggcgtcgtcgcgttcggc
acgctcttgcgcggcgacgagcggccgctgatcgtcgaccggcacgatcacctgtatctg
tcgcgctatttcgactacgaacggcgtcttgccgatgcgctcgtcgcgcaggccggcgtc
gcgcgcgcggacgatgcgctgtcgcccgagcgcctgcgcgagaacctgacacgctatttc
ggtccggcgaccggcgaagtcgactggcagcgtgtcgcggcgatcgtcgcgctgacgggc
cgcgtgacgatcgtcagcggcgggcccggcaccgggaagacgacgaccgtcgtcggcgtg
ctggcctgtctgctcgacgtgcacccggcgctgcgcgttgcgctcgccgcgccgaccggc
aaggccgcgcagcgcatgcaggaagcgctgcacgcgcgtgccggcgacctgccgcccgag
ctggcggcgcggctgcccgacacgtcgtacacgctgcaccggctgctcggcggcggcggt
gcgtcgggctttcgccatcatcgcgacaacccgttgccgtacgacctgatcgtcgtcgac
gaagcgtcgatgatcgacgtcgcgctggccgcgcatctgctcgatgcgctcgcgcccggc
gcgcggctcgtgctgctcggcgacaaggatcagcttgcggcggtcgaggcgggcgcggtg
ttcgcggaactgagcgcacggccgacgtttaccgccgccgcacgcatgcgcatttcgcag
gcgctggggatcgacgaagcggcgttcgctgcggcattgccggtgccggacgatgaggcg
agtgagaacggagcgacgtcggcggcgtcggcagcgccacccgtggcgccgccgccgacg
tcgcccgctgctgccgcgcgcaagacgacacgcaagcgaacggtcgatgtgcggcaagcg
tcgttgttcgacgacgaaccgtacgacgaaggcgcgacggcggccgacagcgactcctcg
ccacgatcgtccaccgacgccaccaatgccaccaacgccacggacccgcacgacgacgcc
cccgcgtggatcgagggtgacgaactcgcatggctcgatgctgccgtgctgccgccggcc
gacgcgaacgcggtggcgcttgcctcgacgccggcagcagcggcgtccgcacgcatcgaa
gcgaccgcaccgtcgcccgccgcgtccgcgcatgcgtccgcgccgctggccgactgcgtc
gtctggctcgaacgcaattaccggttcgggctcgattcgccgatcggccggctgtcgctg
gcgatccgccgcggcgacgtgcaggccgcgctcgatgcgttgcccgccgacgacgcagcc
gccgcgtcgttttacgaagatgtaggggacacgctcgccgcggcgacgatcgaccggctc
gcgcggcggttcgacgcctatctcgacgcgctgcgcacggcgctggccgcgcccacgccc
gatccgctgccgctgttcgacgcactcaaccggttccggatcctctgcgcgacgcgcaac
ggctcgcgcggcgcggaacacgtgaacgcgctcgtcgccgcgcaggtgcggcgtgccgcg
cgcgtgccgctcgcggtcggtgcgcactggttcacggggcggccgatcatggtcacgcgc
aacgactacgcgctcggcctcttcaacggcgatatcgggatcgcgctgcccgatgcgaac
ggcgtgctgcgcgtgtggttccgccgcgcggacgacaccgcacgcgcggtgtcgcctgcc
gcactgccaccgcacgagacggcgtttgcgctgacggtccacaagtcgcagggctccgag
ttcgacgaggccgcgctcgtgctgccggcatcgttcggtcgcgtgctgacgcgcgagctc
gtctataccgcggtcacgcgtgcgcgcgcgcgcgtgcaggtgatcggctcgcggcacgtg
ctcgcgcaggcagtcgcggcgcgcacgcagcgcgattcgggcctgtcggcgcgcgtcgac
gaagcgctcgcgcgacgtcgcgcggaggcaacgcgatga
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