Burkholderia multivorans DDS 15A-1: DM80_421
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Entry
DM80_421 CDS
T03292
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM80_421 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmk03400
]
DM80_421 (recB)
Enzymes [BR:
bmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DM80_421 (recB)
DNA repair and recombination proteins [BR:
bmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM80_421 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIO74343
LinkDB
All DBs
Position
1:complement(483391..487101)
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AA seq
1236 aa
AA seq
DB search
MSAASPSQPALELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEQDLGADQILVVT
FTKAATAELHERIRGRLAQLAHALDTGDDGGDPFVAKLFETTLAAGGPLDAATAAKRIRR
ALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDASLRFELAADFWRTRVEPMA
ARWPGFAAWLVQSGAGPAALDAQLARRLKKPLAALRWDGVAEPDDSADAAAAECFAEAAR
LWDAERDAIDALLRAAQPALNQRSHKPDSIAEAFAAWSAHFAQRDAAAALPKAALKLTRT
ALEKATKKGGATPEHPFFDLADALEAAVAAADAAQRARWLALIAEWLDTAPAELAERKRT
RRVVSFDDLLANLYHALHAHPWLADTLRARYPAALIDEFQDTDPLQFAIFDRIFAPAGPL
FLVGDPKQAIYSFRAADLHTYLAARARASACYTLAVNQRSTPAIVGACNRFFQSNPRAFV
LDGLDYYPVRAGTRTRAPFADETDPAPSGDFRIWMLPGGDGTLLKRDAHAQAAQACAAEI
ARLMRGARDGHVRLGETPLSPGDIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFSTI
DAEQLERVLAAIDAPGDLRRLRAALASDWFGLDAGALWRMEQGDADAQHDAGATDTADAM
SWVERFSRYRLLWRERGFAVMWRTFARELRIAERLMAGADGERRVTDINHLAELTQARAS
AQPGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAIVFCPFLNDGG
LREPPASALPDAREYHDEAGDAVLHYGCDDEAAAHAARQALREQAAERARLVYVALTRAV
YRCYLVAGPYLSSRSTREARRSVLNWLVAGAGRSFDAWLDEPPDDAELDTAWRALAGGPI
SVAPLPAPARRERLLAGHDVSQTLAARHATRVLRDAWRMASFSSLTASIAREEAGVAAVP
DDELRPDHDALAALVPGADIDAAATVAPEPPDDDILVFPRGAAAGECLHRLFELSRFAEP
ASWPAAARGALHDRPVEAEPALAERLPAMMVRLVDDVVHTELVPGLRLADLDPAKRLNEM
GFLFPAPSLDLGALRRLLVAHGYPDVALDAGTLAGFIKGFIDMIVEHDGRFWIVDWKSNH
LGTTPDAYGPQALDATMADHAYHLQALLYTVALHRYLRTRLAGYDYDRHIAGYLYLFVRG
VRPAWRSGGAPAGVHARRPARELVDALDRMMEGGAA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcttcgccatcgcagccggcgctcgaactcgacgtgttcgcgtgtccgctc
gacggcgtgaaccagatcgaggcgtctgccggcaccggcaagacatggaacatctgcgcg
ctgtacgtgcggctgctgctcgagcaggacctcggcgccgaccagatcctcgtcgtcacg
tttacgaaggcggcgaccgccgagctgcatgagcggattcgcggccggcttgcgcagctc
gcgcatgcgctcgatacgggcgacgacggcggcgatccgttcgtcgcgaagctgttcgag
acgacgctcgccgcgggcggtccgctcgatgccgcgacggcggccaagcgtatccgccgc
gcgctgcgcgcgttcgaccaggcggcgatccacacgatccacgcgttctgccagcgggcg
ctgcaggaagcgccgttcgcggctgcgatgccgttcgcgttcgagatggaagcggacgac
gcgtcgctgcgcttcgagcttgcggccgacttctggcgtacgcgcgtcgagccgatggcg
gcgcgctggcccggtttcgccgcctggctcgtacagtcgggcgcggggccggccgcgctc
gatgcgcaactcgcgcgccgcttgaagaagccgctcgcggcgctgcgctgggacggcgtc
gccgagcccgacgattcggcggacgccgcggcggcagaatgcttcgcggaagcggcgcgt
ctctgggacgccgagcgcgacgcaatcgacgcgctgctgcgtgccgcgcagccggcgctc
aaccagcgctcgcacaaacccgattcgatcgccgaggcgttcgccgcatggagtgcgcat
ttcgcgcagcgcgatgcggccgcggcattgccgaaggccgcgctgaagcttacgcgcacc
gcactcgagaaggcgacgaagaagggcggcgcgacgcccgagcatccgttcttcgacctc
gccgacgcgctcgaagcggccgtcgcggccgcggacgccgcgcagcgcgcgcgctggctc
gccctgatcgccgaatggctcgacacggcgccggccgagctggccgagcgcaagcgcacg
cggcgcgtcgtgtcgttcgacgatttgctggcgaacctgtatcacgcactgcatgcgcat
ccgtggctcgccgacacgctgcgcgcgcgctatccggccgcgctgatcgacgagttccag
gacaccgatcccttgcagttcgcgatcttcgaccggatcttcgcgccggccggcccgctc
tttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggccgatttgcatacc
tatctcgccgcgcgcgcgcgtgcgagcgcctgctacacgcttgcggtcaatcagcgttcg
acgccggcgatcgtcggggcatgcaaccgctttttccagtcgaatccgcgcgcgttcgtg
ctggacgggctcgactattacccggtgcgcgcgggcacgcgcacgcgtgcgccgttcgcg
gacgagaccgatccggcgccgtccggcgacttccggatctggatgctgccgggcggcgac
ggcacgctgctcaagcgcgatgcacacgcacaggccgcgcaggcatgcgcggccgagatc
gcgcgcctgatgcgcggcgcgcgcgacggccatgtccggctcggcgagacgccgctctcg
ccgggcgacatcgcggtgctcgtgcagacgcaccggcagggcagcctggtgaagcgcgtg
ctcgccgcgtggggtatcggcagcgtcgaactggcgcaggcgtcggtattctcgacgatc
gatgcggagcagctggagcgcgtgctggcggcgatcgatgcgcccggcgatctgcggcgc
ctacgcgcggcgctcgcgtccgactggttcggcctcgacgcgggcgcactgtggcgcatg
gagcagggcgacgccgatgcgcaacacgatgcgggcgcaaccgatacggccgacgcgatg
agctgggtcgagcggttttcgcgttatcggctgttgtggcgcgaacgcggtttcgcggtg
atgtggcgcacgttcgcgcgcgagctgcggattgccgagcgcctgatggccggcgcggac
ggcgagcgccgcgtgaccgacatcaatcatctggccgaactgacgcaggcgcgtgcgtct
gcgcagccgggcatcgcgccgacgctgcgctggctcgccgcgcagcggctcgacggcggc
ggcgaggaagcgcaattgcggctcgaatcggaccgcaatctcgtgcagatcgtgaccgta
cacaagtcgaaggggctcgaatacgcgatcgtgttctgtccgttcctgaacgacggcggc
ttgcgcgagccgcccgcgtcggcactgcccgatgcgcgcgagtatcacgacgaagcaggc
gacgcggtgctgcattacggctgcgacgacgaggccgccgcgcatgcggcgcggcaggcg
ttacgcgagcaggccgcggaacgcgcgcggctcgtgtacgtggcgctcacgcgcgcggtc
tatcgctgctatctggtcgccgggccttacctctcgtcgcgctcgacgcgcgaggcgcgg
cgcagcgtgctgaactggctcgtcgccggcgcgggccggtcgttcgatgcgtggctcgac
gagccgccggacgatgccgaactcgataccgcatggcgcgcgctcgcgggcggcccgatc
agcgtcgcgccgctgccggcgcccgcacgccgcgagcggctgctggccggccacgatgtg
tcgcagacgctcgccgcgcgtcacgcgacgcgcgtgctgcgcgatgcgtggcggatggcg
agcttcagctcgttgactgcgtcgatcgcgcgcgaggaggccggtgtcgcagcagtgccg
gacgacgaattgcggccggaccacgacgcgctcgcggcgctcgtgccgggcgccgacatc
gatgcggccgcgaccgtcgcgcccgagccgcccgacgacgacattctcgtgtttccgcgc
ggcgccgcggccggcgagtgcctgcaccggctgttcgagctgagccgtttcgcggagccc
gcgtcgtggcccgccgctgcgcgcggcgcgctgcacgaccgtcccgtcgaagccgagccc
gcgcttgccgagcggctgccggcgatgatggtgcggctcgtcgacgacgtcgtgcatacc
gagctcgtgcccgggctgcggctcgccgatctcgacccggcgaagcggctgaacgaaatg
ggcttcctgtttcccgcgccgtcgctcgatctcggcgcgctgcgccggctgctcgtcgcg
cacggctatccggacgtcgcgctggacgcgggcacgctcgccggtttcatcaagggtttc
atcgacatgatcgtcgaacatgacggccgcttctggatcgtcgactggaagtcgaaccat
ctcggcacgacgcccgatgcatacggcccgcaggcgctcgacgccacgatggccgatcac
gcttatcacctgcaggcgctgctttatacggtcgcgctgcatcgctatctgcgcacgcgg
cttgccggctacgactacgatcggcacatcgccggctatctgtacctgttcgtgcgcggc
gtgcggcccgcctggcgcagcggcggcgcgccggccggcgtgcatgcgcggcgcccggca
cgcgagctcgtcgacgcgctcgaccggatgatggaagggggagcggcatga
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