Burkholderia multivorans DDS 15A-1: DM80_6415
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Entry
DM80_6415 CDS
T03292
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bmk
Burkholderia multivorans DDS 15A-1
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmk03032
]
DM80_6415
03400 DNA repair and recombination proteins [BR:
bmk03400
]
DM80_6415
Enzymes [BR:
bmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DM80_6415
DNA replication proteins [BR:
bmk03032
]
Prokaryotic type
DNA Topoisomerases
DM80_6415
DNA repair and recombination proteins [BR:
bmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DM80_6415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AIO71773
UniProt:
A0A2S9MJ22
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All DBs
Position
3:911694..912734
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AA seq
346 aa
AA seq
DB search
MRMSDARAAATLRHVDDRQPGYTRRRVRNGFAYYTQDGERIRDPDEIARINALAIPPAYT
DVWICADPRGHLQATGRDARGRKQYRYHPQWRATRDANKYARMAAFALALPRIRARVARD
LARPGMPREKVVATIVRLLDTTLARIGNAEYARENESYGLTTLRKRHLKIESGQVRLRFV
GKSGVEHDVTVDDPRVARIVRRCAELPGHELFQYVDDDGERHSIGSADVNDYLREVAGAE
FTAKDYRTWAGSVQALALLRRAPHGGVTEARKQIVETVRAVADMLHNTPAVCRRCYIHPD
VLEMYESGRLDTLVIRRAPRGLRADEAAFAALVAGAARRAAKTARA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgtccgacgcgcgcgcggccgccacgctgcgtcacgtcgacgaccggcagccg
ggctacacgcgtcgtcgcgtgcgcaacggcttcgcgtattacacgcaggacggcgagcgg
atccgcgatccggacgagatcgcgcgaatcaacgcgctcgcgattccgcccgcgtacacc
gacgtctggatctgcgcggacccgcgcggccatctgcaggcgaccggccgcgacgcgcgc
gggcgcaagcagtaccgctatcacccgcagtggcgagcgacgcgcgacgcgaacaagtat
gcgcgaatggccgcgttcgcgctcgcgctgccgcgtatccgcgcccgcgtcgcgcgcgac
ctcgcgcggcccggcatgccgcgcgagaaggtcgtcgcgacgatcgtccggctgctcgac
acgacgctcgcgcgcatcggcaacgcggaatacgcgcgcgagaacgagtcgtacgggctg
acgacgctgcgcaagcggcatctgaagatcgaatcggggcaggtgcggctgcgcttcgtc
ggcaagagcggcgtcgagcacgacgtgacggtcgacgatccgcgcgtcgcgcgaatcgtg
cggcgctgcgccgagctgccggggcacgaactgttccagtacgtcgacgacgacggcgaa
cgccactcgatcggctcggcggacgtgaacgactatctgcgcgaggtcgccggcgcggaa
ttcaccgcgaaggactaccggacctgggccggcagcgtgcaggcgctcgcgctgctgcgc
cgcgcgccgcacggcggtgtcacggaagcgcgcaagcagatcgtcgagaccgtgcgcgcg
gtggccgacatgctgcacaacacgccggccgtgtgccggcgctgctacatccaccccgac
gtgctcgagatgtacgagtcgggccggctcgatacgctcgtgatccggcgcgcgccgcgc
gggctgcgcgccgacgaggcggccttcgcggcgctcgtggccggcgccgcgcggcgcgcc
gcaaagaccgcgcgcgcttag
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