Burkholderia multivorans DDS 15A-1: DM80_6425
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Entry
DM80_6425 CDS
T03292
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K03086
RNA polymerase primary sigma factor
Organism
bmk
Burkholderia multivorans DDS 15A-1
Pathway
bmk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DM80_6425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmk03021
]
DM80_6425
Transcription machinery [BR:
bmk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DM80_6425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_ner
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AIO71058
UniProt:
A0A2S9M9R1
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All DBs
Position
3:925844..927682
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AA seq
612 aa
AA seq
DB search
MPDARQPAPAGGHDDTLASASTRFAGLIALGLSRGFVTRGDLIDALPDDDAHDAGIDAAT
AVLAELGIAVSDDAHAETGWSLDRYFRPAPLSRAAAERNGAFAAFDLLVPRTTDPVRLYL
REMGTVPLLTHDEEIAYAQRIERGRAASVAVLCGDPDALDALASIRREIAEGRAAASAYL
MFVDAGGHADAAAALDLHGDAQHDDMRPGEPHVCDAALARLSSLDVLARDMRAALTSGGT
ASRAYRAAARDAAALLRPLRLSARAVERIGAPLRGRARRHREQLARMTRVLRHAGIPSQT
TWRYHDAHDDDHARWLAAGIAAHPECEPALKRSAPALFEARDALASEARASVLPPRTVAL
LDARLDAIERATRAAKTALFDANLRLVVSIAKRYPDRGLPFADLIQEGNIGLLKAIDRYD
HRRGFRFSTYATWWIRQSITHALADLGRTIRVPTHTVDAINKLARLAREHRQRAGATATP
AELAAQMGEPVDKVRDLMAIVKEPVSADLPIAPDGDMTFVDVVPDASTPSPEDAADAAQR
RAAIAAAIDRLPPREALIVRLRYGLHAGEGCSLRDIGRRLNLSAERVRQIEASALARLRA
SGTLAVLRPFVG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatgcacggcagccggcgcccgcgggcggccacgacgacacgctcgcatcggcg
agcacgcgtttcgccggactgatcgcactcggcctgtcgcgcggcttcgtgacgcgcggc
gacctgatcgacgcactgcccgacgacgacgcgcacgatgccggcatcgacgccgcgaca
gccgtccttgcggaactcggcatcgcggtatcggacgatgcccatgcggaaacgggctgg
tcgctcgaccggtacttccggcccgcaccgctctcccgcgcggcggccgagcgcaacggt
gcgttcgcggccttcgatctgctcgtgccgcgcacgaccgatccggtgcggctctatctg
cgcgagatgggcacggtgccgctcctcacgcacgacgaggagatcgcctacgcgcagcgc
atcgagcgcggccgcgcggcgtcggtggcggtgctgtgcggcgatcccgatgcgctcgat
gcgctggcgtcgatccgtcgcgagatcgcggaaggccgggccgctgcatcggcctatttg
atgttcgtcgatgcgggcgggcatgccgatgcagcggccgcactggacctgcatggcgac
gcgcaacacgacgacatgcggccgggcgagccacacgtgtgcgacgcggccctcgcccgt
ctgtcgtcgctcgatgtgctcgcgcgcgacatgcgcgccgcgctgacgtcgggcggcacg
gcgtcgcgcgcgtaccgcgccgccgcgcgcgatgccgcggcgctactgcgcccgctgcga
ctgtccgcacgtgcagtcgagcgcatcggcgcgccgctgcgcgggcgcgcacgacgtcat
cgcgaacagctcgcgcgtatgacgcgcgtgctccgccatgcgggcatcccgtcgcagacg
acctggcgataccacgacgcgcacgacgacgatcacgcgcgctggctcgcggccggcatc
gccgcgcatcccgaatgcgagccggcgctcaagcgcagcgcgccggcgctgttcgaggcg
cgcgacgcgctcgcctcggaggcacgcgcatcggtgctgccgccgcgcacggtcgcgctg
ctcgatgcgcggctcgatgcgatcgaacgcgcgacgcgcgcggcgaagaccgcgttgttc
gacgcgaacctgcggctcgtcgtgtcgatcgcgaagcgctatcccgatcgcgggctgccg
ttcgccgatctgatccaggaaggcaacatcgggctgctgaaagcgatcgaccgctacgat
caccgccgcggcttccgcttctcgacctacgcgacctggtggatccggcagtcgatcacg
catgcgctggccgatctcggacgcacgatccgcgtgccgacgcacaccgtcgacgcgatc
aacaagctcgcacggcttgcgcgcgaacatcggcagcgtgcgggcgcgaccgcgacgcca
gccgagttggccgcgcagatgggcgagccggtcgacaaggtgcgcgacctgatggcgatc
gtgaaggagcccgtttcggccgacctgccgatcgcgccggacggcgacatgacgttcgtc
gacgtcgtgcccgatgcgtcgacaccgtcgccggaagacgcggccgacgcggcgcaacgg
cgcgctgcgatcgccgccgcgatcgaccggcttccgccgcgcgaagcgctgatcgtgcgg
ctgcgctacgggctgcatgcgggcgaaggctgctcgctgcgcgacatcggccgccgtctg
aatctgtccgccgagcgcgtgcggcagatcgaagcgtccgcactcgcacgcctgcgcgcc
tcgggcacgctcgcggtgctgcgcccgttcgtcggatga
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