Burkholderia mallei NCTC 10229: BMA10229_A2379
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Entry
BMA10229_A2379 CDS
T00471
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bml
Burkholderia mallei NCTC 10229
Pathway
bml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMA10229_A2379 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bml03019
]
BMA10229_A2379 (rhlE)
Enzymes [BR:
bml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMA10229_A2379 (rhlE)
Messenger RNA biogenesis [BR:
bml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMA10229_A2379 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
Ric8
DegT_DnrJ_EryC1
P-loop_SecA
CMS1
Sacchrp_dh_NADP
Cas3-like_C_2
CARD_2
Motif
Other DBs
NCBI-ProteinID:
ABN00943
UniProt:
A2S8S2
LinkDB
All DBs
Position
I:complement(2418826..2420292)
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AA seq
488 aa
AA seq
DB search
MSFASLGLAEPLVRAVNELGYTQPTPIQAQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHAFYAENRSARRAVRALILTPTRELAAQVEESVRAYSKYVKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDVSSLDILVLDEADRMLDMGFIHDIKRVLAKLPA
KRQNLLFSATFSDEIKSLADSLLDSPALIEVARRNTTAETIAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALSEFKSSTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRTGRAGANGEAVSLVCVDEKQL
LRDIERLIKREIPQQVIPGFEPDPNAKPEPIQRRGQRGAVAGNGGSGNGNSGGAGNGGRG
NRAPRAASQPQAQQGQAAARRDGGTQAKAAKPQQARGGNSRPAGNGNSNGGGAHANRSRS
SRSGQRGR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgcatctctcggtctcgccgaaccgctcgtgcgggccgtcaacgagctgggc
tacacgcagcccacgccgatccaggctcaggccattcccgccgtgctgggcggcggcgat
cttctcgccggcgcccagacgggcaccggcaagaccgccggcttcacgctgccgatcctg
caacgcctgcacgcgttctacgcggagaaccgcagcgcgcgccgcgcggtgcgcgcgctc
atcctcacgccgacgcgcgagctcgccgcgcaggtcgaggaaagcgtgcgcgcgtacagc
aaatacgtgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gacgcgttgaagcgcggcgtcgacatcgtcgtcgcgacgccggggcgcctgctcgaccac
atgcagcagaagacgatcgacgtgtcgagcctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccggcg
aagcgccagaacctgctgttctcggcgaccttctccgacgagatcaagtcgctcgcggac
agcctgctcgattcgcccgcgctgatcgaggtcgcgcgccgcaataccacggccgagacg
atcgcgcagaagatccacccggtcgatcgcgatcgcaagcgcgagctgctcacgcatctg
atccgcgagcacaactggtttcaggtgctcgtgttcacgcgcaccaagcacggcgcgaac
cggcttgccgaacaactgacgaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcgcgcacgcgcgcgctgtccgaattcaagagcagcacgctgcaggtgctc
gtcgcgaccgacatcgccgcgcgcgggatcgacatcgatcagttgccgcacgtcgtcaac
ttcgatctgccgaacgttcccgaggactacgtgcaccggatcggccgcaccggccgcacc
ggccgcgcgggcgcgaacggcgaggcggtgtcgctcgtgtgcgtcgacgagaagcagttg
ctgcgcgacatcgagcggctcatcaagcgcgagattccgcagcaggtgattccgggcttc
gagccggacccgaacgcgaagccggagccgatccagcggcgcgggcagcgcggcgccgtc
gccggaaacggcgggagcggcaacggcaacagcggcggcgcgggcaacggcggccgcggc
aatcgcgcgccgcgcgcggcaagccagccgcaagcgcagcaaggccaagccgccgcgcgg
cgcgacggcggcacgcaagcgaaggccgccaagccgcaacaggcgcgcggcggcaacagc
cgcccggcgggcaacggcaattcgaacggcggcggcgcgcatgcgaatcgcagccgttcg
tcgcgcagcggccagcgcggccgctga
DBGET
integrated database retrieval system
