Burkholderia mallei NCTC 10229: BMA10229_A2911
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Entry
BMA10229_A2911 CDS
T00471
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bml
Burkholderia mallei NCTC 10229
Brite
KEGG Orthology (KO) [BR:
bml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bml03400
]
BMA10229_A2911 (phrB)
Enzymes [BR:
bml01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BMA10229_A2911 (phrB)
DNA repair and recombination proteins [BR:
bml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BMA10229_A2911 (phrB)
Prokaryotic type
BMA10229_A2911 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
LPD1
Motif
Other DBs
NCBI-ProteinID:
ABN00767
UniProt:
A2SA88
LinkDB
All DBs
Position
I:2936162..2937766
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AA seq
534 aa
AA seq
DB search
MGAAHAARKRDIAGVRPPSVFDRPAPRLPRYGRAAPAVFRQLFIGALPLSSSISIAPAVV
WFCDDLRVSDHPALMRAAESGRPVIGVYVFDERAGGRPLGGAARWWLHGSLRALGAALAA
LGGTLALLRGDEHDTIVSFAAALGAGAVYWSRRYALAARAVDNAVQTALDAQGIAVETFN
ASLLFEPGDLVNADGRPYQVFSAYWRAAMRRGVPAPPLGAPRRLNGGALPAALARQCVAL
DALGLEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDRPGIASTSRLSPY
VRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHHFPDLPRRNLRHT
LDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCASFLVKHLLIDWR
AGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKFDPDGAYVRRWVP
ELAGLPPATIHEPWAAPGAQLAAAGVRLGETYPLPIVAYDAARRRALDAFGAIR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgggggcggcgcatgccgcgcgaaagcgcgatatcgcgggcgttcgtccgccgagcgta
ttcgatcggccggcgccgcgcctgccgcgatacggccgggcagcgccggccgtgtttcgt
cagcttttcatcggagcccttccattgtcttcatccatctcgattgcgcccgccgtcgtc
tggttttgcgacgatctgcgcgtgtccgatcatcccgcgctcatgcgcgccgccgagtcg
gggcgccccgtgatcggcgtctacgtgttcgacgagcgcgccggcgggcggccgctgggc
ggcgcggcgcgctggtggctgcacggctcgttgcgcgcgctcggcgcggcgctcgccgcg
ctgggcggcacgctcgcgctgctgcgcggtgacgagcacgatacgatcgtttcgttcgcc
gcggcgctcggcgcgggcgccgtctactggagccgccgctatgcgcttgccgcgcgcgcg
gtcgacaacgcggtgcagacggcgctcgacgcgcagggcatcgcggtcgagacgttcaac
gcgagcctgctgttcgagccgggcgacctcgtcaacgcggacggccgcccgtatcaggtg
ttcagcgcgtactggcgcgcggcgatgcgccgcggcgtgccggcaccgccgctcggcgcg
ccgcggcgcctgaacggcggcgcgctgccggcggcgctcgcgcggcagtgcgtggcgctc
gacgcgctcgggctcgagccgacgggcccggactgggcgggcggcctgcgcgacgcatgg
cgtttcggcgaggacgccgcgcaccgtcggctgcgcgccttcgtcgacagccggctcggc
ggctatgcggccgagcgcgaccggccgggcatcgcgtcgacgagccggctgtcgccgtac
gtgcgcttcggcaacctgtcggcgcggcagctctggcatgcggccgccgacgcgtacgcg
cacggcgcggcgacccaggcggacctcgacaagtttctgagcgagctcggctggcgggag
ttcggctggacccagttgcaccactttccggacctgccgcgccgcaacctgcgccacacg
ctcgacggcatgccgtggcgggacgatcccgccgcgcttgcagcatggcggcgcggcgcc
acgggctatccgttcgtcgacgccggcatgcgcgagctctgggcgacgggctggatgcac
aaccgcgtgcggatggtatgcgcttcgtttctcgtcaagcacttgctgatcgactggcgg
gcgggcgaggcgtggttctgggacacgctcgtcgacgcggacgcggcgtcgaacgccgcg
aactggcagtgggtcgcgggctgcggcgcggatgccgcgccgtatttccggatcttcaat
ccggtcgcgcagggccggaagttcgatccggacggcgcctatgtgcggcgctgggtgccc
gagctggccggcctgccgcccgcgacgatccacgagccgtgggcggcgcccggcgcgcag
ctcgccgcggcaggcgtgcggctcggcgagacttatccgctgccgatcgtcgcgtacgat
gccgcgcgccggcgagcgctcgacgcattcggggcaatcagatga
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