Blattabacterium sp. (Mastotermes darwiniensis): MADAR_241
Help
Entry
MADAR_241 CDS
T01642
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bmm
Blattabacterium sp. (Mastotermes darwiniensis)
Pathway
bmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MADAR_241 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmm03021
]
MADAR_241 (rho)
03019 Messenger RNA biogenesis [BR:
bmm03019
]
MADAR_241 (rho)
Transcription machinery [BR:
bmm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MADAR_241 (rho)
Messenger RNA biogenesis [BR:
bmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MADAR_241 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA
AAA_25
ATPase_2
N_NLPC_P60
Mor
AAA_24
DUF488-N3a
Spore_III_AA
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AER40555
LinkDB
All DBs
Position
251799..253289
Genome browser
AA seq
496 aa
AA seq
DB search
MYDITELKSKKLFELQEIARLSGLKKCTQLRKNELLEKIISILNIKNNPSSSKIENSLLK
KGFKGRKKKLTSPSQENLKNYSKSSEESAKKYPKRYFQNWKKNDRSESIGTVKKNSNKYC
SPEYEFDGIIISEGVLEIMPENYGFLRSSDFNYLSSPDDIYVSQSQIRLFGMKTGDTIRG
EVRPPKDGEKYFPLIKIIEINGRNPSFVRGRDSFEHLTPLFPNEKFKIAEKKATLSTRIV
DLFTPIGKGQRGMIVAPPKTGKTTLLKEIANAIAANHPEVYLIILLIDERPEEVTDMQRN
VKGEVIASTFDEPAERHVKVANIVLQKAKRMVECSHDVVILLDSITRLARAYNTVAPASG
KVLSGGVDANALHRPKRFFGAARNIEDGGSLSIIATAMIDTGSKMDEVIFEEFKGTGNKE
LQLDRKIANKRIYPAIDLVSSSTRKDDLLLDPNTLQRMWILRKHLSDMNPVEAMEFLISR
IARTQNNEEFLISMNG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatattacggaattaaaaagtaaaaaactttttgaattacaggaaatcgcccgt
ttgtcaggattaaaaaaatgtacacaactacgaaaaaacgagctacttgaaaaaataatt
tccattctcaatattaaaaacaatccttcttcttcaaagatagaaaattctttattaaaa
aaaggatttaaaggtagaaaaaaaaaattaacttctccttctcaagagaatttaaaaaac
tattccaaaagttcagaagaatctgcaaaaaaatatccaaaaagatatttccaaaattgg
aaaaaaaacgatagatcagaatctattggaacagtaaaaaaaaattctaataaatattgt
tctccagaatatgaatttgatggaattatcattagcgaaggagtattagaaattatgcca
gaaaattatggttttttaagatcttccgatttcaattatttatcttctcccgatgatatt
tacgtttctcaatctcaaattagactttttggaatgaaaacaggagatactataagagga
gaagtccgcccacctaaagatggagagaaatattttcctttaattaaaattattgaaatc
aatggaagaaatccttcctttgtaagaggaagagattcttttgaacatttaactccactt
tttccaaatgaaaaatttaaaatagctgaaaaaaaagccactctttctacaagaatagta
gatcttttcactcctataggaaagggacaaagaggtatgattgttgcacctccaaagaca
ggaaaaactactttattgaaagaaatagccaatgctattgctgctaatcatccagaggta
tatctgattatattgcttattgatgaacgtccagaggaagtgaccgatatgcaacgaaat
gttaaaggagaagtaatagcatctacttttgatgaaccagcagaaagacatgtaaaagta
gctaatattgtattacaaaaagctaaaagaatggtagaatgttctcatgatgttgttata
ttactggattctataacacgtttagcacgtgcgtataatactgttgctcctgcttctggg
aaagttttatcaggaggagtagatgctaatgctttacatagaccaaaaagattttttgga
gctgctagaaatatagaagatggaggctctttatccattattgctaccgctatgattgat
acaggatcaaaaatggatgaggtaatttttgaagagtttaaaggaacaggaaataaagaa
cttcaattggataggaaaatagctaataaaagaatttatccagctatcgatctcgtttct
tctagtacaagaaaggatgatcttttgttggatcccaatacattacaaaggatgtggatt
ttacgaaaacatctttccgatatgaatccagtagaagctatggaatttttaatatcgcgt
atagccagaactcaaaataacgaagaatttttaatatccatgaatggatga
DBGET
integrated database retrieval system
