Blattabacterium sp. (Mastotermes darwiniensis): MADAR_505
Help
Entry
MADAR_505 CDS
T01642
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bmm
Blattabacterium sp. (Mastotermes darwiniensis)
Pathway
bmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MADAR_505 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmm03019
]
MADAR_505 (pnp)
03016 Transfer RNA biogenesis [BR:
bmm03016
]
MADAR_505 (pnp)
Enzymes [BR:
bmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MADAR_505 (pnp)
Messenger RNA biogenesis [BR:
bmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MADAR_505 (pnp)
Transfer RNA biogenesis [BR:
bmm03016
]
Prokaryotic type
tRNA degradation factors
MADAR_505 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AER40793
UniProt:
G7SQI4
LinkDB
All DBs
Position
503906..506050
Genome browser
AA seq
714 aa
AA seq
DB search
MSDTVKEIISLEDGRTIVIETGQLAKQADGSAIVRVENTTLLATVVVSKEIKSGINFLPL
TVDYREKYSAGGKIPGGFIKREGRPSDEEILTMRLVDRVLRPTFSEYFRKEIQIMISLLS
YDQTVLPDGLAGLAASTALSVAGIPFNGPISEIRIVRVNGRFIINPSLDQLEQSDIDLIV
GASINSILMIEGEMKEITESEFINAIAIAHKAIKPQIKAQIQLVKKLPNRLSFFENNNII
ADSSLEQENMKKKLFSFSYEKTYKVYKNFLDKTTRSIQENTILNNFKQKLSIEEREKNEI
LINQCYEEIKKKITRHMILEEGIRLDGRNNKQIRTIYSIVDYLPGVHGSALFSRGETQSL
TTVTLGSSLDANRIDNVIMENQEKFYLHYNFPPFSTGEIRPIRGVSRREIGHGNLAQRAL
KNVIPETPYTIRVVSDILESNGSSSMATVCAASLALMDAGIALEKPVSGISMGLFINKKK
TVILSDIMGCEDSFGELDFKITGTKYGITACQMDVKTIREFSYDLFKKILMQALEGRMFI
LKKMLETLPIYRKKLKPNAPKIYTLNIPKNFIGSVIGPGGKVIQEIQSCTKTSILIEEKG
NMGYIEIIGKDYKKMDEAINRIKEITFVPELGKVYKAKVKSIKDFGAFVEISKGVEGLLH
ISEIGWKRLNNIEEEFHIGDIIDVKFMGIDDRNKKMKLSRKVLLPRPKKKMINK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatacagtaaaggaaattatatctttagaagatggacgtactattgttatagaa
acaggacaattagctaaacaagcagatggatctgctatagtacgtgtagaaaatacaaca
ttattagctactgtagtagtatccaaagaaataaagagtggaattaactttttaccatta
acagtagattatagagaaaaatattccgctggaggtaaaatacctggaggattcataaaa
agagaaggaagaccttctgatgaagaaattttgacaatgagattagtggatcgtgtttta
agacctactttttcagaatattttcgaaaagaaatacaaatcatgatttcccttttatct
tatgatcaaacagttttaccagatggattagctggtttggctgcctctacagctttatct
gtagcgggaattccatttaatggaccaatatcagaaatccgtattgtacgggtaaatgga
agattcatcataaatcccagtttagatcaattggaacaatcggatatagatttaatagta
ggagcttctataaattctattcttatgatagaaggagaaatgaaagaaatcacagaaagt
gagtttattaatgctattgccatagctcataaagctataaaacctcaaataaaagcacaa
atacaattggtaaagaaacttccaaatcgattgtctttttttgaaaataacaatataata
gccgattcttctttggaacaagagaatatgaaaaaaaaacttttctctttttcttatgaa
aagacttataaagtctataaaaattttttggacaaaaccactagatccattcaggaaaat
acaatattaaataattttaaacaaaaattatccatagaggaaagagaaaagaatgaaatt
cttataaatcaatgttatgaagaaataaaaaaaaaaataacaagacatatgattttagaa
gaaggaattagactggatggaagaaataataaacaaatacgtaccatatatagtatagtg
gattatcttcctggagttcatggttctgctttattctctagaggagaaactcaatcgtta
actacagtgaccttaggatcatctttggatgctaatagaatagacaatgttataatggaa
aaccaagaaaaattttatctacattataattttcctcctttttcaacaggagaaatacgt
ccaattagaggagtatctcgacgagaaataggtcatggaaatttagcacaacgtgcatta
aaaaatgttattcctgagactccatatacaattcgtgtagtttcggatattctagaatct
aatggttcttcttctatggctacagtttgtgcagcaagtttagcattaatggatgcagga
attgctcttgaaaaacctgtttccggtatttctatggggttattcatcaataaaaaaaaa
acagttattctttctgatattatgggatgtgaagatagttttggagaacttgattttaaa
ataacagggacgaaatatggaattacagcttgtcaaatggacgttaaaacaatacgagaa
ttttcctatgatcttttcaagaaaattttaatgcaagctttagaaggtcgtatgtttatt
ttaaaaaaaatgctagaaactctgcctatatatagaaaaaaattgaaacctaatgctcct
aaaatatacactttgaatattccaaaaaattttataggttctgtcattggtcctggagga
aaagtcattcaagaaatacaatcttgtaccaaaacaagtatactaattgaggaaaaaggg
aatatgggttatattgaaattataggaaaggattataaaaaaatggatgaggcaattaat
agaattaaagaaataacttttgtccctgaacttggaaaagtttataaagctaaagttaaa
tctataaaagattttggtgcttttgttgaaatatctaaaggagtggaaggtttgttgcat
atttctgaaataggatggaaaagattaaacaatatagaagaggaattccatattggagat
atcattgatgtaaaatttatgggaatagatgatagaaataaaaaaatgaaactttctaga
aaagtacttttacctcgtcctaaaaaaaaaatgatcaataaataa
DBGET
integrated database retrieval system
