Burkholderia mallei NCTC 10247: BMA10247_0408
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Entry
BMA10247_0408 CDS
T00479
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bmn
Burkholderia mallei NCTC 10247
Pathway
bmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMA10247_0408 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmn03019
]
BMA10247_0408 (pnp)
03016 Transfer RNA biogenesis [BR:
bmn03016
]
BMA10247_0408 (pnp)
Enzymes [BR:
bmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BMA10247_0408 (pnp)
Messenger RNA biogenesis [BR:
bmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BMA10247_0408 (pnp)
Transfer RNA biogenesis [BR:
bmn03016
]
Prokaryotic type
tRNA degradation factors
BMA10247_0408 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
Methyltransf_FA
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
UPF0181
Motif
Other DBs
NCBI-ProteinID:
ABO05379
UniProt:
A3MI97
LinkDB
All DBs
Position
I:397123..399264
Genome browser
AA seq
713 aa
AA seq
DB search
MSLFNKIVKEFQWGQQKVRLETGEIARQASGAVIVDIEDTVVLATVVGAKSAKPGQDFFP
LTVDYIEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYVNNEYVLNPTREQIKASRLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVREGGKPEWDWQPAPK
DEALNARVTELAQPELLAAYQIRDKQARLTKLKEVYAATSAKLEEEAVAAGTVAADKATV
GNILFDLEAKIVRGQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVA
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTADGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMKDAVAGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTNSEGMAEAKKRIENITAEIEVGHVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAQADTPPQQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgttcaataaaatcgtgaaggaattccagtggggccagcagaaggtgcgcctc
gaaaccggtgaaatcgcgcgccaggcaagcggcgccgtgatcgtcgacatcgaggacacc
gtcgtgctcgcgaccgtcgtcggcgcgaagtcggcgaagccgggccaggatttcttcccg
ctcaccgtcgactacatcgagaagacctactcggccggcaagatcccgggcggcttcttc
cgccgcgaaggccgtccgtcggagcacgaaacgctgacgtcgcgcctcatcgaccgcccg
ctgcgcccgctcttccccgaaggcttctataacgaagtgcaggtcgtgatccacgtgctg
tccgtgaacccggagattccggcggacatcccggcactcatcggcgcatcggctgcgctc
gccgtgtccggtctgccgttcaacggcccggtcggcgccgcgcgcgtcgcgtacgtgaac
aacgaatatgtgctgaatccgacgcgtgagcagatcaaggcgtcgcgcctcgatctcgtc
gtcgcgggcacggagcgtgcggtgctgatggtcgagtcggaagccgaccaactgccggag
gacgtgatgctcggcgcggtggtgttcggccacgagcagatgcaaacggcgatcgacgcg
atccacgagctcgtgcgcgaaggcggcaagcccgagtgggactggcagccggcgccgaag
gacgaggcgctgaacgcgcgcgtgaccgaactcgcgcagccggagctgctcgccgcctac
cagatccgcgacaagcaggcgcgcttgacgaagctgaaggaagtgtacgcggcgacgtcg
gcgaagctggaggaagaagcggtggcggccggcacggtcgcggcggacaaggcgaccgtc
ggcaacatcctgttcgacctcgaggcgaagatcgttcgcggccagatcctgaacggcgag
ccgcgcatcgacggccgcgacacgcgcacggtgcgcccgatcgaaatccgcacgggcgtg
ctgccgcgcacccacggctcggcgctgttcacgcgcggcgagacgcaggcgctcgtcgtc
gcgacgctcggcacgaagggtgacgaacagatcatcgacgcgctcgaaggcgaataccgc
gagcgcttcatgctccactacaacatgcccccgttcgcgaccggcgaaacgggccgcgtc
ggctcgccgaagcgccgtgagatcggccacggccggctcgcgaagcgcgcgctcgtcgcg
tgcctgccgagcgccgacgaattcggctactcgattcgcgtcgtgtcggaaatcaccgaa
tcgaacggctcgtcgtcgatggcgtcggtgtgcggcggctgtctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgcgggcatcgcgatgggcctgatcctcgagggcaac
aagttcgcggtgctgaccgatatcctcggcgacgaggaccacctcggcgacatggacttc
aaggtggccggcacggcggacggcgtgaccgcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggccgcatgcacatc
ctcggcaagatgaaggacgcggtcgcgggcgcgaacacgcaactgtccgaattcgcgccg
cgcatgatcacgatcaagatcaacccggaaaagattcgcgacgtgatcggcaagggcggc
tcggtgatccgcgcgctgaccgaagaaaccggcacgacgatcgacatctcggatgacggc
gtcgtgacgatcgcgagcacgaacagcgaagggatggccgaggcgaagaagcgcatcgag
aacatcacggccgagatcgaagtcggccacgtgtacgaaggcacggtgctcaagctgctc
gatttcggcgcgatcgtgaacctgctgccgggcaaggacggcctgctgcacatctcggaa
atcgtcaacgagcgcgtgaaggacatcaacgactacctgaaggaaggccagcaggtgaag
gtcaaggtgatccagacggacgagaaggggcgcgtgcgtctgtcggcgaaggcgctgctg
aacgaggcggccgcccaggcggatacgccgccgcagcagtaa
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