Burkholderia mallei NCTC 10247: BMA10247_1038
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Entry
BMA10247_1038 CDS
T00479
Name
(GenBank) hfq protein
KO
K03666
host factor-I protein
Organism
bmn
Burkholderia mallei NCTC 10247
Pathway
bmn02024
Quorum sensing
bmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMA10247_1038
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BMA10247_1038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmn03019
]
BMA10247_1038
03036 Chromosome and associated proteins [BR:
bmn03036
]
BMA10247_1038
Messenger RNA biogenesis [BR:
bmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BMA10247_1038
Chromosome and associated proteins [BR:
bmn03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BMA10247_1038
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hfq
Mucin-like
LSM
Hfq_1
SelB_WH1
EDC3_N
Motif
Other DBs
NCBI-ProteinID:
ABO05848
LinkDB
All DBs
Position
I:1030195..1030839
Genome browser
AA seq
214 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSREPRGDGGYGSREPRGDGGYGAREPREPREPRESYGAP
QEGASTPSGTQERNGNGPVIVTRRRRSLGPTDGQ
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggcgacggcggctac
ggttcccgcgaaccgcgtggcgacggcggctacggttcccgcgaaccgcgtggcgacggc
ggctatggcgcgcgcgagccgcgtgaaccgcgcgagccccgcgagtcttacggcgcgccg
caagaaggcgcatcgacgccgtccggcacgcaggaacgcaacggcaacggcccggtgatc
gtcacgcgccgtcgccgttcgctcggcccgaccgacggccaataa
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