KEGG   Burkholderia mallei NCTC 10247: BMA10247_1038
Entry
BMA10247_1038     CDS       T00479                                 
Name
(GenBank) hfq protein
  KO
K03666  host factor-I protein
Organism
bmn  Burkholderia mallei NCTC 10247
Pathway
bmn02024  Quorum sensing
bmn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BMA10247_1038
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BMA10247_1038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmn03019]
    BMA10247_1038
   03036 Chromosome and associated proteins [BR:bmn03036]
    BMA10247_1038
Messenger RNA biogenesis [BR:bmn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BMA10247_1038
Chromosome and associated proteins [BR:bmn03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BMA10247_1038
SSDB
Motif
Pfam: Hfq Mucin-like LSM Hfq_1 SelB_WH1 EDC3_N
Other DBs
NCBI-ProteinID: ABO05848
LinkDB
Position
I:1030195..1030839
AA seq 214 aa
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSREPRGDGGYGSREPRGDGGYGAREPREPREPRESYGAP
QEGASTPSGTQERNGNGPVIVTRRRRSLGPTDGQ
NT seq 645 nt   +upstreamnt  +downstreamnt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggcgacggcggctac
ggttcccgcgaaccgcgtggcgacggcggctacggttcccgcgaaccgcgtggcgacggc
ggctatggcgcgcgcgagccgcgtgaaccgcgcgagccccgcgagtcttacggcgcgccg
caagaaggcgcatcgacgccgtccggcacgcaggaacgcaacggcaacggcccggtgatc
gtcacgcgccgtcgccgttcgctcggcccgaccgacggccaataa

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