Burkholderia mallei NCTC 10247: BMA10247_1188
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Entry
BMA10247_1188 CDS
T00479
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bmn
Burkholderia mallei NCTC 10247
Pathway
bmn03030
DNA replication
bmn03430
Mismatch repair
bmn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMA10247_1188 (holB)
03430 Mismatch repair
BMA10247_1188 (holB)
03440 Homologous recombination
BMA10247_1188 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmn03032
]
BMA10247_1188 (holB)
03400 DNA repair and recombination proteins [BR:
bmn03400
]
BMA10247_1188 (holB)
Enzymes [BR:
bmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMA10247_1188 (holB)
DNA replication proteins [BR:
bmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMA10247_1188 (holB)
DNA repair and recombination proteins [BR:
bmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMA10247_1188 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
DNApol3-delta_C
nSTAND3
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
ABO07387
LinkDB
All DBs
Position
I:complement(1175778..1176812)
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AA seq
344 aa
AA seq
DB search
MIYPWQTDDWNRLQALRAHWPHALLLYGQAGIGKLAFARHLAKGFLCETPRENGEPCGAC
AACTWFEQGNHPDYRIVVPEALAAELPGAADEPKAADADEGGKKARTPSKEIKIEQVRAL
VDFCGIASHRGGARVVVLYPAEALNVAAANALLKTLEEPPSGVVFLLASARVDRLLPTIV
SRCRQWPMAVPAPDAAAAWLAAQQVADANALLAEAGGAPLAALALANDENRPLRDWTLAQ
LAAGAACDPFACGETLQKLPVPVVLGWLQRWLYDLLAERAAGAPRYFPAQRAALARCAAA
ADANAFARFLKTVTRQRAVENHPLSARLVFEELFLGYRELFASP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatctatccgtggcagaccgacgactggaaccgcctgcaggcgctgcgcgcgcattgg
ccgcacgcgctgctgctgtacgggcaggcgggaatcggcaagctcgccttcgcgcggcac
ctcgcgaagggcttcttgtgcgagacgccgcgcgagaacggcgaaccgtgcggcgcgtgc
gccgcgtgcacgtggttcgagcagggcaatcaccccgattaccggatcgtcgtgcccgag
gcgctcgcggccgagctgccgggcgcggccgacgagccgaaggccgccgacgccgacgaa
ggcggcaagaaggccaggacgccgagcaaggaaatcaagatcgagcaggtgcgcgcgctc
gtcgacttctgcgggatcgcgtcgcatcgcggcggcgcgcgcgtcgtcgtgctgtatccg
gccgaggcgctgaacgtcgcggccgcgaacgcgctattgaagacgctcgaggagccgccg
tcgggcgtcgtgttcctgctcgcgtccgcgcgcgtcgaccggctgctgccgacgatcgtg
agccgctgccggcagtggccgatggcggtgcccgcgcccgacgcggccgccgcgtggctc
gcggcgcagcaggtggcggacgcgaacgcgctcctcgccgaggcggggggcgcgccgctc
gccgcgctcgcgctcgcgaacgacgagaaccggccgctgcgcgactggacgctcgcgcag
ctcgcggcgggcgccgcgtgcgatccgttcgcgtgcggcgagacgctgcagaaactgccc
gtgcccgtcgtgctcggctggctgcagcgctggctgtacgatctgctcgccgagcgcgcg
gcgggcgcgccgcgctatttccccgcgcagcgcgcggcgctcgcgcgctgcgcggcggcg
gccgacgcgaacgcgttcgcgcgcttcctgaagacggtcacgcggcagcgcgcggtggag
aaccatccgctcagcgcgcgcctcgtgttcgaagagctgtttctcggctatcgggaactg
ttcgcgtcgccctga
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