Burkholderia mallei NCTC 10247: BMA10247_2326
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Entry
BMA10247_2326 CDS
T00479
Symbol
rpoD-2
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bmn
Burkholderia mallei NCTC 10247
Pathway
bmn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BMA10247_2326 (rpoD-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmn03021
]
BMA10247_2326 (rpoD-2)
Transcription machinery [BR:
bmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BMA10247_2326 (rpoD-2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABO06636
LinkDB
All DBs
Position
I:complement(2289484..2290932)
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AA seq
482 aa
AA seq
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MKVSARELRYEQGIDRLLELAGARDDTEYANVADEFASAPSSAFAHDLGEPDSLDHQASD
ESAGAGSFGDKPTRPAHGDTDVDTDWRDDDAPPSGSNDAAPVDTAASTDPLALFVRRMHA
VPLLTHAQEIALAAEIEAGREQVLQALAEALDRLDLASLPADPALGRARAALQRARARGD
EGARAFARARTAAYAALAAHGWPSAEVDAVRRAMRRLPTSPEKSDAGAQRAFADGEARIS
AATARMAEANLRLVLSIARKYASRGLDLADLLQEGNLGLLRAIEKFEHRRGFKFSTYATW
WIRQAISRAIAERARTIRVPVHVGDEARRVRKAADRIERRSGVSASLAELSEATGLPAER
LRAVLTLPREPRSLNAPLGDDDQAEFGDIVEDTSTPSLFDALAHGQMCDVVTSLLKTMSA
QEADILRRRFGIGGDEPWSYEQIAARAGVSREQVRRIEKRALQTLRVTAEACNAHDFLDV
QP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctcagcgcgcgaattgcgctacgaacagggcatcgaccggttgctcgaactt
gccggcgctcgcgacgacacggaatacgccaatgtcgccgacgagttcgcgagcgcgccg
tccagcgcgttcgcgcatgatctcggcgagcccgattccctggatcaccaagcatccgac
gaaagcgcaggcgccggctcgttcggcgacaagccgacgcggcccgcgcacggcgacacc
gatgtcgacaccgactggcgtgacgacgatgcgccgccctccggatcgaacgacgccgcg
ccggtcgacaccgcggcctcgactgatccgctcgcgctcttcgtacgccggatgcacgcg
gtgccactgctgacgcacgcccaggaaatcgcgctcgccgccgaaatcgaggcgggacgc
gagcaggtgctgcaagcgctcgccgaagcgctcgaccggctcgacctcgcgtcgttgccg
gccgatccggcgcttggccgtgcgcgcgccgcgctgcagcgcgcacgcgcgcgcggtgac
gaaggcgcgcgcgcgtttgcccgcgcgcgcacggcggcatacgcggcgctcgccgctcac
ggctggccgtcggcggaagtcgacgcggtgcggcgggcaatgcgccggctgccgacatcg
ccggaaaagagcgacgcgggcgcgcaacgtgcgttcgcggacggcgaagcgcgcatctcg
gccgcgaccgcgcgaatggcggaagcgaacctgcggctcgtgctgtcgatcgcgcgcaag
tacgcgtcgcgcggcctggatctcgccgatctgctgcaggaaggcaacctcggcctgctg
cgcgcgatcgagaaattcgagcatcggcgcggcttcaagttttcgacgtatgcgacgtgg
tggattcgtcaggcgatttcgcgcgcgatcgccgagcgcgcacgcacgattcgcgtgccg
gttcatgtcggcgacgaagcgcgccgcgtgcgcaaggccgccgatcggatcgaacggcgc
agcggtgtaagcgcatcgctcgccgagctgtcggaggcgaccgggctgccggccgagcgg
ctgcgcgcggtgctgacgctgcctcgcgagccgcgctcgctgaacgcgccgctaggcgat
gacgaccaggccgaattcggcgacatcgtcgaggatacgtcgacgccgagcctgttcgat
gcgctcgcccacgggcagatgtgcgacgtcgtcacgtcgctgctgaaaacgatgtccgcg
caggaagccgacatcctgcgccggcgcttcggcatcggcggcgacgagccgtggagctac
gagcagatcgccgcgcgagcgggcgtgtcgcgcgagcaggtacgccgcatcgagaagcgc
gcgctgcagacgctgcgcgtgacggccgaagcgtgcaacgcgcacgacttcctcgacgtg
cagccgtaa
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