Burkholderia mallei NCTC 10247: BMA10247_2942
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Entry
BMA10247_2942 CDS
T00479
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bmn
Burkholderia mallei NCTC 10247
Pathway
bmn02020
Two-component system
bmn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BMA10247_2942 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BMA10247_2942 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmn03021
]
BMA10247_2942 (rpoN)
Transcription machinery [BR:
bmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BMA10247_2942 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF2344
HTH_IclR
HTH_38
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABO06230
LinkDB
All DBs
Position
I:complement(2900037..2901545)
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AA seq
502 aa
AA seq
DB search
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVATAIAQNPLLENDDDWIASPLRV
AADGSVIAQTPASSAPEPMAGAPNGTAATNERTERDETAGVDEYDSYSADGGDASQWNLD
DFGRSPAASDDDDLPPMQIHETSTSLRDHLMAQLRVTQASPRDRALVTFLIESLDDDGYL
SASLEEVLADLPAELEVDVDELNAALALVHSFDPAGVGARSASECLKLQLLRLDPSPTRA
LALDIVSQHLELLAARDFTRLRKQLKATDDALRDAHALIRSLEPFPGAAYGKAEADYVVP
DIIVKKAGQNWQAELNPEVVPKLRINNLYANILRNSRGDPSAGSLKQQLQEARWLIKNIQ
QRFETILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTPF
GTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDPKSPLSDSRIAELLAEQGFVVA
RRTVAKYREALKIPAVNLRKSL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagtcttcaacttcgcctgtcgcagcatctcgcgctcacgccccagcttcag
cagtcgatccggctgttgcaactgtcgacgctcgaactgcaacaggaagtcgcgacggcg
atcgcgcagaacccgctgctcgagaacgacgatgactggatcgcgagcccgttgcgcgtc
gcggccgacggctcggtgatcgcgcagacgcccgcgtcgtccgcgcccgagccgatggcg
ggcgcgccgaacggcacggctgcgaccaatgagcgcaccgagcgcgacgaaaccgccggc
gtcgacgaatacgacagctattcggccgacggcggcgacgcgagccagtggaacctcgac
gacttcggccgctcgcccgccgcgtccgacgacgacgatctgccgccgatgcagatccac
gagacgtcgacgtcgctgcgcgatcatctgatggcgcagttgcgcgtcacgcaggcgagc
ccgcgcgatcgcgcgctcgtcacgttcctgatcgaatcgctcgacgacgacggctacctg
agcgcgtcgctcgaggaagtgctcgccgatctgccggcggagctcgaggtcgacgtcgac
gaactgaacgcggcgctcgcgctcgtgcacagcttcgatccggcgggcgtcggcgcgcgc
tccgcgtccgaatgcctgaagctgcagttgctgcgcctggatccgtccccgacgcgcgcg
ctcgcgctcgatatcgtgtcgcagcatctggagctgctcgccgcgcgcgatttcacgcgc
ctgcgcaagcaactgaaggcgaccgacgacgcgctgcgcgacgcgcacgcgctgatccgc
tcgctcgagccgttccccggcgcggcgtacggcaaggccgaagccgattacgtggtgccc
gacatcatcgtgaagaaggccggccaaaactggcaggcggaactcaatccggaagtggtg
ccgaagctgcggatcaacaatctttacgcgaacatcctgcgcaacagccggggcgatccg
agcgcgggatcgctgaagcaacagcttcaggaagcgcgctggctgatcaagaacattcag
cagcggttcgagacgatcctgcgcgtcgcgcaggcgattgtcgagcgtcagaagaatttc
ttcgcgcacggcgaaattgcgatgcgccccttggttttgcgggaaatagctgatacgctg
ggcctacacgagtcgactgtctcccgtgtgacaaccggcaagtacatgctgaccccgttc
ggcacacttgaatttaagtacttcttcggatcgcacgtatcgacagacaccggaggtgcc
gcgtcgtcgacagcgatccgcgccctcatcaaacaactgataggagccgaagaccccaaa
tcccctctttcggacagtcgcatagccgagctgctagcggaacaagggttcgtggtcgcg
cgccgcacggttgccaaatatcgcgaagccctcaagatcccggcggtgaatctgcgcaag
tctctgtag
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