Burkholderia mallei NCTC 10247: BMA10247_A0353
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Entry
BMA10247_A0353 CDS
T00479
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bmn
Burkholderia mallei NCTC 10247
Pathway
bmn03030
DNA replication
bmn03410
Base excision repair
bmn03420
Nucleotide excision repair
bmn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMA10247_A0353 (polA)
03410 Base excision repair
BMA10247_A0353 (polA)
03420 Nucleotide excision repair
BMA10247_A0353 (polA)
03440 Homologous recombination
BMA10247_A0353 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmn03032
]
BMA10247_A0353 (polA)
03400 DNA repair and recombination proteins [BR:
bmn03400
]
BMA10247_A0353 (polA)
Enzymes [BR:
bmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMA10247_A0353 (polA)
DNA replication proteins [BR:
bmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BMA10247_A0353 (polA)
DNA repair and recombination proteins [BR:
bmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BMA10247_A0353 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMA10247_A0353 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ABO02312
LinkDB
All DBs
Position
II:307017..309797
Genome browser
AA seq
926 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIVNMLRRMRKDVSAEY
SACVFDAKGKTFRDDLYADYKAHRPPMPPDLALQIEPIHTAVRALGWPLLMIEGVEADDV
IGTLAKQAEQHGMNVIVSTGDKDLAQLVTDRVTLINTMTNEALDRDGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAVKWLTQYGSLDGVVEHAGEIKGGVGDNLRRALDFLP
LARKLVTVETGCELAPHVESFDASLATDGEGRDALREIFAKYGFKTWLRELDSEPAAAAG
AAGAAAAGAAPDPASGATAELPLATARNYATVQTWEQFDAWLAKISAAELTAFDTETTSL
DPMRAEIVGLSFSVEPGHAAYVPVAHRGPDMPAQLPRDEVLAKLTPWLEDAGKKKLGQHL
KYDAQVLANYGIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAQ
QIGFDEVPLAQASEYAAEDADITLQLHHALYPQIAREPGLTRVYRDIELPVSLVLRKMER
TGVLIDGDRLSRQSGEIATRLVALEQEAYALAGGEFNLGSPKQIGQIFFERLQLPVVKKT
PSGAPSTDEEVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPDTGRVHTNYAQA
VAVTGRLASNDPNLQNIPVRTTEGRRIREAFVAPPGSKIVSADYSQIELRIMAHISEDES
LLRAFAHGEDIHRATAAEVFGVTPLEVTSDQRRIAKVINFGLIYGMSSFGLASNLGITRD
AAKLYIDRYFLRYPGVARYMEETRMRAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERA
AINAPMQGTAADLIKLSMIAVDDWLERGGLRARMIMQVHDELVLEVPEDELSIVREKLPE
MMCGVAKLKVPLVAEVGVGENWEEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgcggccctggcggggagccgaccgga
gcgctctacggaatcgtcaatatgttgcgccgcatgcgcaaggatgtcagtgcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaaccttccgcgacgatctgtatgccgactac
aaggcgcaccgcccgccgatgccgcccgatctcgcgctgcagatcgagccgatccatacg
gccgtgcgcgcgctcggctggccgctgttgatgatcgagggcgtcgaggccgacgacgtg
atcggcacgcttgcgaagcaggccgaacaacacggcatgaacgtgatcgtctcgacgggc
gacaaggatctcgcgcaactcgtcaccgatcgcgtcacgctcatcaacacgatgacgaac
gaggcgctcgaccgcgacggcgtgctcgcgaagttcggcgtgccgccggagcggatcgtc
gattacctgtcgctcatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtcaagtggctcacgcagtacggctcgctcgacggcgtcgtcgaacat
gcgggcgagatcaagggcggcgtcggcgacaacctgcgccgtgcgctcgatttcctgccg
ctcgcgcgcaagctggtgacggtcgagaccggctgcgagctcgcgccgcacgtcgaatcg
ttcgacgcgtcgctcgcgacggacggcgagggccgcgacgcgctgcgcgagatcttcgcg
aagtacggcttcaagacgtggctgcgcgagctcgacagcgaacccgccgccgcggccggt
gcggccggtgcggccgccgccggcgccgcgccggatccggcgagcggcgcgacggccgaa
ctgccgctcgccacggcgcgcaactacgcgaccgtgcagacgtgggagcagttcgacgcg
tggctcgcgaagatctccgccgcagagctgaccgcgttcgacaccgagacgacgtcgctc
gacccgatgcgcgcagagatcgtcggcctgtcgttctcggtggagccgggccatgccgcg
tacgtgccggttgcgcaccgcgggccggacatgcccgcgcaactgccgcgcgacgaagtg
ctcgcgaagctcacgccgtggctcgaggatgcgggcaagaagaagctcggccaacacctg
aagtacgacgcgcaggtgctcgcgaactacggcatcgcgctgaacggcatcgagcacgac
acgctgctcgaatcgtatgtgctcgaatcgcaccgcacgcacgacatggacagcctcgcg
ctgcgccatctcggcgtgaagacgatcaagtacgaggacgtggcgggcaagggcgcgcag
cagatcggcttcgacgaggtgccgctcgcgcaggcgtccgagtatgcggcggaagacgcc
gacatcacgctgcagctgcatcacgcgctgtatccgcagatcgcgcgcgagccgggcctc
acgcgcgtgtatcgcgacatcgagctgccggtgtcgctcgtgttgcgcaagatggagcgc
accggcgtgctgatcgacggcgacaggctgagccgccagagcggcgagatcgcgacgcgg
ctcgtcgcgctcgagcaggaggcgtacgcgctcgcgggcggcgaattcaatctcggctcg
ccgaagcagatcggccagattttcttcgagcggctgcaattgcccgtcgtcaagaagacg
ccgagcggcgcgccgtcgaccgacgaggaggtgctgcaaaagctcgccgaggactatccg
ctgccgaagctgttgcttgagcaccgcggcctgtcgaagctgaaatcgacctataccgac
aagctgccgcgcatggtcaatccggacacgggccgcgtgcacacgaactatgcgcaggcg
gtggcggtcaccgggcggctcgcgtcgaacgatccgaacctgcagaacatcccggtgcgc
acgaccgaagggcggcgcatccgcgaggcgttcgtcgcgccgccgggcagcaagatcgtg
tccgccgactactcgcaaatcgagctgcgcatcatggcgcacatctcggaggacgaatcg
ttgctgcgcgcgttcgcgcacggcgaggacattcaccgcgcgaccgcggcggaggtgttc
ggcgtgacgccgctcgaagtgacgtccgatcagcggcgcatcgcgaaggtgatcaacttc
ggtctgatctatgggatgagttcgttcggcctcgcgtcgaatctcggcatcacgcgcgat
gcggcgaagctctatatcgaccgctacttcctccgctatccgggcgtcgcccgctacatg
gaggaaacgcgcatgcgggcgaaggagaagggctacgtcgaaaccgtgttcggccgccgc
ctgtggctgcccgagatcaacggcggcaacgggccgcgccgccaggccgccgagcgcgcg
gcgatcaacgcgccgatgcagggcacggccgccgatctgatcaagctgtcgatgatcgcg
gtcgacgactggctcgagcgcggcggcttgcgcgcgcgaatgatcatgcaggtgcacgac
gaactcgtgctcgaggtgccggaggacgagctgtccatcgtgcgcgagaagctgccggag
atgatgtgcggcgtcgcgaaactgaaggtgccgctcgtcgccgaggtcggcgtcggcgag
aactgggaagaggcgcactga
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