Borrelia miyamotoi LB-2001: I871_02375
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Entry
I871_02375 CDS
T02797
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bmo
Borrelia miyamotoi LB-2001
Pathway
bmo02020
Two-component system
bmo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I871_02375 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I871_02375 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmo03021
]
I871_02375 (rpoN)
Transcription machinery [BR:
bmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I871_02375 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_26
Sigma54_AID
MarR
HTH_5
Arg_repressor
HTH_IclR
HTH_27
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AGT27425
LinkDB
All DBs
Position
complement(471062..472339)
Genome browser
AA seq
425 aa
AA seq
DB search
MLIKQNLKLTQKLQITQINAMKMLSIEKKELIKIISDEIENNEYLQVDSSKIFFETLKTY
QVRKFLYKENDDNKTQYEIALDKTSPKPSLQEHLLLQLRIQRLSEAEIHIVEIIINNLNS
RGLYIINPYDFFTKEDWSQVNKMIELIRKFDPIGICVPNIIESLILQAKYHKLDAKIIKI
LEKADYLLANNQDKLKEEIKLSSQDLSKALETIKLNLNPNPTFEFKDKYDTNEYIEPDII
IINKDNKPKIKIKEVNIFKKEVKKQEVKDLKNYKQAKWFIESLRYRDETLAKIGIAIYTL
QKEFLRRGFKSLRPMKLADISEKINLSKSTISRTKKNKYLKFDWGTISIKKLFNSVGGAK
TNEFSKLSIKLVIKGILEQNKKMADNQISDILKAKGINISRRTVNKYRNELKFEGEIYGT
YNTNY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctaataaaacaaaatttaaagctaacacaaaaattacaaataacgcaaatcaatgca
atgaaaatgttaagtatcgaaaaaaaagaactaataaagattatatcagatgaaattgaa
aataatgaatatcttcaagtagactcaagtaaaatatttttcgaaacactaaaaacttat
caagttagaaaatttctctacaaagagaatgatgataataaaacacaatacgaaattgca
ctagataaaacatcacccaagccttctcttcaagaacatcttttactacaattaagaatt
caaagactcagtgaagctgagattcacatagtagaaatcataataaacaatctaaatagc
agaggactgtatataatcaatccttatgacttctttacaaaagaagattggtctcaagta
aataaaatgatcgaactaattcgaaaattcgatccaataggaatttgcgtacctaacata
atagaatcattaatactacaagcaaaatatcataaattagatgccaagataataaaaatc
cttgaaaaagcagattatttacttgcaaataatcaagacaagctaaaagaagaaattaaa
ctcagctctcaagacttaagtaaagctcttgaaactatcaaacttaaccttaatcccaat
cccacatttgagtttaaagataaatacgatacaaacgaatatattgaaccagatatcatt
attatcaataaagataataaaccgaagataaaaattaaagaagtcaatattttcaaaaaa
gaagttaaaaaacaagaggttaaagatttaaaaaattataaacaagcaaaatggttcatt
gaatctctaagatacagagatgaaacactggctaaaataggaatagcaatatatacattg
caaaaagaatttttacgaagaggcttcaaaagtctaagaccaatgaaattggctgatata
tccgaaaaaattaatctatcaaaatcaactatatcaagaacaaaaaaaaataaatactta
aaattcgactgggggacaatatcaattaaaaaactatttaattcagtcggtggtgctaaa
acaaatgaattctcaaaattaagcattaaattagtgataaagggaatattagagcaaaat
aagaagatggcagataatcaaatttctgatatactaaaagctaaaggtatcaatatttca
aggagaactgtaaataaatatagaaatgaattaaaatttgaaggagaaatttatggaacc
tacaatacaaactattaa
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