Borrelia miyamotoi LB-2001: I871_03290
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Entry
I871_03290 CDS
T02797
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bmo
Borrelia miyamotoi LB-2001
Pathway
bmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I871_03290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmo03400
]
I871_03290
Enzymes [BR:
bmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I871_03290
DNA repair and recombination proteins [BR:
bmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I871_03290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
PIF1
NAT10_TcmA_helicase
AAA_22
DEAD
SLFN-g3_helicase
RsgA_GTPase
PhoH
T2SSE
NPHP3_N
SH3_13
AAA_5
AAA
RNA_helicase
AAA_28
AAA_16
Zeta_toxin
TsaE
DUF3349
Motif
Other DBs
NCBI-ProteinID:
AGT27574
LinkDB
All DBs
Position
complement(659345..661183)
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AA seq
612 aa
AA seq
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MRNYLVLREFLKNNNRNHLAPELKIYEIIEALNINIGNCYKAYSITKKIQNKKCEELTIF
LIFLFNYLSKGHLRANINLLIKDIQKTIECAFLELEEKNQFYQKSINILEEIAKFTKPTK
INEILLHLKENNVIKDYNKDEKITTPLILENDIHIYTQKNFREEEELIQKIDQRLKNNKS
KISDQRIKNIITNLNTKGLSEEQINSIKKSLKSNFFILSGGPGTGKTTTINYILKAIDIH
LNVKQKVALIAPTGKASQKLKSSLKESFKKIETEYGTIQKLLKTSFISKGNKYDESNFLE
FEIIIIDEASMIDASTFLKLLKAIKISTKLIITGDKNQLPSIAGGNVYSSLMKIKEISAE
NVEILKKNFRSNNEINLLAEAIYKEDANLIALQLNVNKNIILKDIKKVNIENELLNYRKN
LYKDISNFDLNSLKDKEVESIINILLNTIILCSKNFGRFGIKRINEIIKLDLKKIYGNLI
GQIILITQNDYKNNLFNGERGILFKEDSKIYALFKREDEKYKKINLNLLNKYELSFATTI
HKSQGSEYKHVQIIIEDHPFLTKELLYTAITRAKESIEIISNKDIIKNVSLKRIERDSKI
LEHINALNQIDK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattatttagtcttaagagaatttttaaaaaacaataatagaaatcatttagct
ccagaactcaaaatttatgaaataatagaggctttaaacataaacataggcaattgctac
aaagcatactcaatcacaaaaaaaatacaaaataaaaagtgtgaagaacttactattttt
ttaatatttctattcaattacctttctaaaggtcatttaagagctaatattaatttacta
ataaaagatattcaaaaaacaattgaatgtgctttccttgaattagaagaaaaaaatcaa
ttttaccaaaaatcaataaatatactagaagaaattgcaaaatttacaaaaccaacaaaa
ataaacgaaatactcttacatttaaaagaaaataatgtaataaaagattacaataaagat
gaaaaaatcacaactcctttaatattagaaaatgatattcacatctatacccaaaaaaat
tttagagaagaagaagaactaatacaaaaaatagatcaaagacttaagaataataaaagt
aaaataagcgatcaaagaataaaaaacattataaccaacttaaacactaaaggactaagt
gaagaacagattaattcaatcaaaaaatctttaaaaagtaatttctttatactcagcggc
ggtcctggaacaggcaaaacaacaactatcaattatattttaaaggcaatcgatattcac
ttgaatgtcaaacaaaaagtagctcttatagcaccaactggaaaagcaagtcaaaaacta
aagtcaagtttaaaagaatcatttaaaaaaattgaaacagaatatggcacaatacaaaaa
ttattaaaaacttcatttatcagtaaaggcaacaaatatgacgaatctaattttctagaa
tttgaaataataataattgacgaagcatctatgatagatgcaagcactttcttaaaattg
ttaaaggcaattaagataagcacaaaacttatcataacaggagataagaatcaacttcca
tcaatagctggaggaaatgtatattcaagtcttatgaaaataaaagaaataagtgctgaa
aatgtagaaatacttaaaaaaaactttagaagtaataatgagataaatttattagcagaa
gcaatatataaagaagatgcaaatctaattgctcttcaacttaacgttaacaaaaatatc
attttaaaagatatcaaaaaagtaaatattgaaaatgaattattaaattacagaaaaaat
ttatacaaagatatctctaactttgatcttaactcactaaaagacaaagaagttgaatca
ataatcaatattctgcttaacaccatcattttatgctcaaaaaattttggaagatttgga
ataaaaagaataaatgaaataataaaattagatttaaaaaaaatctatggcaatttaatt
ggacaaataattctaattactcaaaatgactataaaaataatctatttaatggagaaaga
ggtattctttttaaagaagattccaaaatttacgctttattcaaaagagaggatgaaaaa
tataaaaagataaatcttaatttactaaacaaatatgaacttagttttgcaacaacaata
cataaaagccaaggttctgaatataaacatgtacaaataataatagaagatcatccattt
ttaacaaaagaactactatatactgcaataacaagagctaaagaaagtatagaaataata
tcaaacaaagatattattaaaaatgttagcctaaaaagaatagaaagagattcaaaaatc
ttagagcatataaatgcattaaatcaaattgacaaataa
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