Borrelia miyamotoi LB-2001: I871_04240
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Entry
I871_04240 CDS
T02797
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bmo
Borrelia miyamotoi LB-2001
Pathway
bmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I871_04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmo03019
]
I871_04240
03016 Transfer RNA biogenesis [BR:
bmo03016
]
I871_04240
Enzymes [BR:
bmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I871_04240
Messenger RNA biogenesis [BR:
bmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I871_04240
Transfer RNA biogenesis [BR:
bmo03016
]
Prokaryotic type
tRNA degradation factors
I871_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH_KhpA-B
KH_PNO1_2nd
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AGT27745
LinkDB
All DBs
Position
851622..853805
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AA seq
727 aa
AA seq
DB search
MDLESNKGLILKKVLKLKIGREDLILETGLLAKQANGAVLATYGGSTVLATVCCSNSIRE
DLDFIPLSVEYNEKYYAAGKIPGGFIKREGKPKDKEVLVSRLIDRPMRPLFDKRFGREIQ
VVPTTLSTDQMNPPDIVGMNAAFASVFLSDIPFDGPIAAVRIAYFNNEFIVNPSFSEIEN
SMLDIVVAGSLDGITMVEGGANEVSEEVLISAIDQAYEYIKQICNLQKEFISIIDKREKL
PLAYEERVFEFKDELKSLIYSELKDACFVRGKLNRDKAIKLVQKKAYEHFSSINQVNEES
ELLFYKAFDDFEREIVRKSILEDNLRTDGRTPTQIRNIVAEVDLLKRTHGSALFTRGETQ
TLAVTTLGTSIDEQIMDDIDGDKRLNFMLHYNFPPFSVGETGRLMTGRREIGHGHLAQRS
LEAMLPKKDDFPYTIRVVSEVLESNGSSSMATVCSGSMSLMAAGVPVKEQVAGIAMGLVN
EGDKYVVLSDILGEEDHLGDMDFKVAGTKNGITGFQMDIKISNVTRQLMKEALEQARIGR
MHILSIMDSVISKSRDDISVNAPKIIQLQIDIDKISLVIGSTGKTVKAITDEFEVRVQIE
QDGRINLFGTDSLKMQKAKERIESIVREPKIGEIYEGIVKKINSFGAFIELTPIKEGFLS
NRAKLRDDRYGDIRNSKYGNSRHSRYGRDNRTTFSMRPPRLEEGQMIKVRISDIDKFGKI
ELEFVRD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
ttggacttagaaagtaataaggggttaattttgaaaaaagttttaaagttgaaaatagga
agagaagatttaattttggaaacaggcttattggctaagcaagcaaatggtgcagttctt
gctacttatggtggttctactgttcttgctacggtctgttgctcaaattcaattcgtgaa
gatttagattttattcctttgtctgttgaatataatgaaaagtattatgctgctggaaaa
attcctgggggatttattaagagagaaggtaaaccgaaagataaagaagtacttgtttct
agattaatagatagaccgatgagacccctttttgataagaggtttggtagagaaattcag
gttgttcctacaactttgtctacagatcagatgaatcctcctgatattgttgggatgaat
gctgcatttgcatcggtttttttatcggatattccgtttgatggtccaattgctgctgtt
agaatagcctatttcaataatgaatttatagtaaatccttcttttagtgagatagaaaat
tctatgcttgatattgttgttgcagggagtttggatgggattacaatggttgaaggtggt
gctaatgaagttagcgaggaagttttaatttctgctatagatcaagcttatgaatatatt
aaacaaatttgtaatctccaaaaggaatttatatctataatcgataagagggaaaaattg
ccacttgcttatgaggaaagagtatttgagtttaaggatgaacttaaaagtttaatttat
tctgaacttaaggatgcttgctttgtgaggggcaagcttaatagagataaggctataaaa
ttagtccaaaagaaagcctatgaacatttttcttctatcaatcaagtaaatgaagagagt
gaattgcttttctataaagcttttgatgattttgagcgagaaattgttagaaaatcaatt
cttgaagataatcttagaactgatggacgtactcctacacagataagaaatattgttgct
gaagttgatctgttaaagagaacacatggttctgctctttttacaagaggtgaaactcag
acattggctgtaacaactttgggcacaagtattgatgaacagataatggatgatattgat
ggtgataagcgtcttaattttatgcttcattataattttcctcctttctctgttggagag
acaggtagactaatgactggcaggcgtgagattggacatgggcacttagctcaaaggtct
ttggaagccatgttacctaaaaaagatgattttccatatactattagggtagtatctgaa
gtattagaatcaaatggttcatcatcaatggctacagtatgttctggtagtatgtcttta
atggcagctggagttcctgttaaggagcaagttgcaggaatagctatgggtcttgttaat
gagggcgataagtatgttgttttaagtgatattcttggagaagaggatcacttaggggat
atggattttaaggttgcaggcactaagaatggaatcactggttttcagatggacattaag
atttcaaacgttacaagacagttaatgaaggaagctcttgaacaggcacgaattgggaga
atgcatattctatctattatggattctgttatttcaaaatcaagagacgatatatctgtt
aatgctcctaagattattcaattacaaattgatattgataaaatttctcttgttattggg
tctactggtaaaacagttaaagcaattacagatgaatttgaagttagagttcaaattgag
caagatggaaggattaatctttttggaactgatagcttaaagatgcaaaaagctaaggaa
agaatagagagtattgtcagagaacccaagatcggtgaaatttatgaaggaattgttaaa
aagattaacagttttggagctttcattgagcttactcctataaaggaaggatttttgagt
aaccgagcaaaattaagagatgatagatatggtgatattaggaattctaagtatggtaat
agtagacattctagatatggtagagataataggactacatttagtatgcgtcccccaaga
ttagaggaaggccaaatgattaaggtcagaatatctgatatcgataagtttggtaagatt
gagcttgaatttgttagagattag
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