Borrelia miyamotoi LB-2001: I871_04400
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Entry
I871_04400 CDS
T02797
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bmo
Borrelia miyamotoi LB-2001
Pathway
bmo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I871_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmo03400
]
I871_04400
DNA repair and recombination proteins [BR:
bmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I871_04400
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I871_04400
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
UvrB_inter
UvrB
ResIII
UVR
DEAD
AAA_30
Viral_helicase1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AGT27775
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Position
893086..895050
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AA seq
654 aa
AA seq
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MRFCLKFDYYPAGDQPKAIQEIKQSILLNNKYQTLKGVTGSGKTFTIANIIRDLERPSLI
ISHNKTLAAQLYREFKDFFPNNAVEYFVSYYDYYQPESYVPSKDLYVEKEATINEEIEIK
RIRTITSLSRRRDVIVIATVSSIYALGSPKLFKNAAQFFFVGQKISIKEIADIFVKLQYS
RTLVNIEHNKFSIKGDVIEVWPSNEHGDFAYRICLDFDEIVRITRISPLTKKVLGSTDEF
TLFAKSYFVIPYENVLDSLPKIYADLEIQCHYFKENGKLVEAERLKQRVEYDIEMLRETG
SCQGIENYYKYFDKSEMGRPYCLFDFFPRDYLLFIDESHVTLPQFRGMYNGDYSRKLNLV
NFGFRLPSALENRPLKYNEFESLINQAVFISATPGLEEYEKSNIIVEQIIRPTGLVDPEI
VLRMSDGQMEDIYREIQKRIALNEKVLITTLTKKMAEDLTDYLLSLGIKARYLHAELNAI
ERVDIITSLRRSEINVIVGINLLREGLDIPEVSLVIILDADKVGFLRSTTSLIQMIGRAA
RNSNGCVIMYYDQVSCAMQEAINETNRRRNIQIEYNKKNNVIPRTVIKRVQNILEKELKR
ETVDYNSEKVISDKKLSQKDLIIKLKFKLDEAVSDERFEDAIFLRDKIREILKG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttgtttaaagtttgattattatcctgctggtgatcaaccaaaagcaattcaa
gaaattaagcaatctattttacttaataataaatatcaaactttaaagggtgttacaggt
agtggtaaaacttttacaatagctaatattattagagatttggagcgtccttctttgata
attagtcataataaaacattagcagcacagctttatagggaatttaaagatttttttcca
aataatgcagttgaatattttgtttcttattatgattattatcaacctgagtcttatgtc
ccttcaaaagatttgtatgtagaaaaagaagctactattaatgaggaaattgagataaag
aggataaggacgataacatctctttccagaaggcgagatgttattgttattgctacggtt
tcttcaatttatgcgttaggctctccaaaactttttaagaatgcggctcagttttttttt
gtaggacaaaaaatttctattaaggagatagcagatatttttgttaagcttcagtattca
agaacacttgtgaatattgaacataataagttttctattaagggtgatgttattgaggta
tggcctagtaatgaacatggtgattttgcatatagaatttgtttggattttgatgagatt
gttaggataactaggattagtccacttacaaaaaaggttttaggctctactgatgaattc
actctatttgctaaatcttattttgttattccttatgaaaatgtattggattctcttcct
aaaatatatgctgatttagaaatacaatgccattattttaaggaaaatggtaagcttgtt
gaggccgaaagacttaaacagagagtagagtatgatattgagatgttaagagagactggg
tcatgtcagggtatagaaaattattataaatattttgataagagtgaaatgggtagacct
tattgtctttttgatttttttcctagggattatttgctctttattgatgagtctcatgtt
actttacctcagtttagaggaatgtataatggagattattcaagaaaattgaatcttgtt
aattttggatttagacttccatcggcacttgagaatagaccccttaaatataatgagttt
gagtctttaattaatcaggctgtctttatttcagcaactcctggtcttgaagaatatgaa
aagagtaatattattgttgagcaaataatacgtcccacaggtcttgttgatccagaaatt
gtgcttagaatgtcggacggacagatggaagatatttatagagaaattcagaaaagaata
gctttaaatgaaaaagttttaattacaactttgactaaaaaaatggctgaggatttaaca
gattatttgttgagtcttggcataaaggctagatatctgcatgcagagctcaatgcaatt
gagagagtagatattattacatctcttagaagatcagaaattaatgttattgtggggatt
aacttgttaagagaaggtttagatattcctgaagtttctcttgttattatattagatgct
gataaagtaggctttttaagatctactacttctttgattcaaatgattggtagggctgct
agaaactcaaatggttgtgttataatgtactatgatcaagtaagttgtgcaatgcaagaa
gccattaacgaaactaatagaagacgtaatattcaaattgagtacaataaaaaaaataat
gttattccaagaacggttattaaaagagtacaaaatattttagagaaagaattaaaacgt
gaaacagttgattataatagtgaaaaagttatttctgataaaaaattgtctcaaaaagat
cttattattaagcttaaatttaaacttgatgaggcagttagtgatgaaaggtttgaggat
gctatctttctacgagataaaataagagagattcttaaaggataa
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