Bacillus mojavensis: HC660_01340
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Entry
HC660_01340 CDS
T07122
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bmoj
Bacillus mojavensis
Pathway
bmoj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmoj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HC660_01340 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmoj03021
]
HC660_01340 (rpoC)
03400 DNA repair and recombination proteins [BR:
bmoj03400
]
HC660_01340 (rpoC)
Enzymes [BR:
bmoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HC660_01340 (rpoC)
Transcription machinery [BR:
bmoj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HC660_01340 (rpoC)
DNA repair and recombination proteins [BR:
bmoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HC660_01340 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QJC94666
UniProt:
A0ABX6LS12
LinkDB
All DBs
Position
125273..128872
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAIHKLLQ
DIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTEEQRSKLLITTVGKLVFNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGA
DVKAAIAQQPINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFRYSTKAGITVGV
SDIVVLDDKQEILEEAQGKVDNVMKQFRRGLITEEERYERVISIWSSAKDVIQGKLMKSL
DELNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAQPLREGTEIIERLE
ERLIGRFARKQVKHPETGEVLVNENELIDEDKAIEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATITEIDGTVVEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDKITR
GQVLTEGSIDPKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGSLLDIHQFTEANKKVLLEGKRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKAKPVSNVQSTEDMVPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccggataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttaaaa
cctgaaaaggacggtctattctgcgaacgcattttcggaccgactaaggactgggaatgt
cattgcgggaagtacaagcgagttcgttataaaggcgtagtttgtgaccgctgcggagtt
gaagtaacacgggctaaagtccgtcgtgagagaatggggcacattgaactggctgcccca
gtttcccacatttggtatttcaaaggtattccaagccgtatgggtcttgtgttggatatg
tcgcctcgtgcattggaagaagttatttactttgcttcttatgttgtaactgatccggca
aatacaccgcttgaaaagaaacagcttctatctgaaaaggaataccgtgcgtatcttgat
aagtacggcaataagttccaagcatctatgggtgctgaagcgattcataaacttcttcaa
gatatcgatcttgtaaaagaagttgatatgttaaaagaagagctgaaaacatctcaagga
cagcgtcgtactcgtgcgatcaaacgccttgaagtgttagaagccttccgtaactcagga
aacaagccttcttggatgatcctagatgtgcttcctgttattcctcctgagctcagaccg
atggttcagcttgatggcggacgttttgcgacttctgatttgaacgacctttatcgtcgt
gtcatcaaccgtaacaatcgtttgaaacgccttttagaccttggtgcgcctagcattatc
gttcaaaacgaaaagcgtatgcttcaagaggctgtcgatgctttaattgacaacggccgt
cgcggacgccctgtaacaggtcctggtaacagaccattaaaatctctttctcatatgctg
aaagggaagcaaggacgtttccgtcaaaaccttcttggtaaacgtgtcgattactccgga
cgttctgtaatcgtcgttggtcctcatttgaaaatgtaccaatgcggattaccgaaggaa
atggcgctcgaacttttcaaacctttcgttatgaaagagcttgttgaaaagggtcttgct
cacaacattaagagtgcgaaacgtaaaattgagcgcgtacagcctgaagtatgggatgta
ctagaatcagttatcaaggagcatccggtacttctgaaccgtgcccctacgcttcacaga
ttaggtatccaagcgtttgaaccaacacttgttgaaggacgcgcaatccgtcttcacccg
ctcgtatgtacagcttataacgctgactttgacggtgaccaaatggcggttcacgtacca
ttatctgcagaagctcaagctgaagcacgcatcttgatgcttgccgctcaaaacatcttg
aaccctaaagatggtaaaccggttgtaacaccgtctcaggatatggtactgggtaactat
tacctgactctagagcgtgccggtgctgtcggtgaaggtatggtcttcaagaatacggat
gaagcgcttcttgcttatcaaaacggatatgttcatcttcatacgagagtcgctgttgca
gcgaactcccttaagaacgtgacatttaccgaagagcagcgctcaaaattgttaattaca
actgtcggtaaactggtcttcaatgaaattcttccagaatcattcccttacatgaatgaa
ccaacgaagagcaacattgaagagaaaacacctgaccgtttcttcttagaaaaaggtgcc
gatgtaaaagctgccatcgcacagcagccaatcaatgcaccgtttaaaaaaggtattctg
ggtaaaatcatcgcggaaatctttaaacgattccacattacggaaacgtctaaaatgctt
gaccgcatgaaaaacctaggtttcagatattcaacaaaagctggtattacagttggggtt
tctgacatcgtcgttctcgatgataaacaagaaattcttgaagaagcacaaggcaaagtt
gataacgttatgaagcagttccgccgcggtctgatcactgaagaagaacgctatgagaga
gtcatctctatctggagttctgcaaaagatgttatccaaggcaaactgatgaaatcactt
gatgagctcaacccgatctacatgatgagtgactctggtgcccgtggtaacgcgtctaac
tttactcagcttgccggaatgcgcggcctgatggccaacccggctggacgtatcattgag
ttaccaatcaaatctagtttccgtgaaggtctgacagtattggagtactttatctccact
cacggtgcgcgtaaaggtcttgccgataccgcccttaaaactgctgactcaggttacctt
acacgccgtcttgttgacgttgcacaggatgttatcatccgtgaaactgattgtggaact
gaccgaggcatccttgctcaaccgcttagagaaggcactgaaatcattgagcgcttagaa
gaacgcttaatcggccgttttgcaagaaaacaagtgaaacatcctgaaacaggtgaagtg
cttgtaaacgaaaacgaactgattgatgaggataaagcgattgaaatcgtagaagccggc
attgaagaagtgtggatccgttctgccttcacatgtaatacgcctcatggtgtatgtaaa
cgatgctatggccgaaaccttgcgactggtaccgatgtagaagtcggtgaagcagtcggc
atcatcgctgcccaatcaatcggtgagcctggtacacagttaacaatgcgtacattccat
acaggcggggttgcaggagacgatatcacacaaggtcttccgcgtatccaagagcttttc
gaagcgcgtaatccaaaaggtcaggcaacaattaccgaaatcgacggtacagtcgttgaa
atcaatgaagttcgcgacaaacagcaggaaattgtggttcaaggcgcagttgaaacacgc
tcttatacggcaccatataactcccgcttaaaagtagcggaaggagataaaattactcgc
ggccaagtgctgacagaaggttcaatcgatccgaaagaacttcttaaagtgactgacctg
actactgttcaagagtatcttcttcatgaggttcaaaaggtttaccgtatgcagggtgtt
gaaatcggcgataaacacgtagaagtaatggttcgccaaatgcttcgtaaagtacgtgtg
attgatgccggtgatactgatgtgcttcctggctcattacttgatattcaccaatttact
gaagcgaacaaaaaggtattgctggaaggcaaacgtccagctacaggccgtcctgtctta
ctcggtattaccaaagcttctcttgaaactgattcattcttatctgctgcttccttccag
gagacaacacgtgtccttacagacgcagcgatcaaaggtaagcgtgatgaacttctcggc
ctgaaagagaatgttatcatcggtaagcttgttccggctggtactggaatgatgaaatac
cgaaaagcaaaacctgtttcaaatgttcaatcgactgaggacatggttccggttgaataa
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