Bacillus mojavensis: HC660_11180
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Entry
HC660_11180 CDS
T07122
Symbol
addB
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bmoj
Bacillus mojavensis
Brite
KEGG Orthology (KO) [BR:
bmoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmoj03400
]
HC660_11180 (addB)
Enzymes [BR:
bmoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HC660_11180 (addB)
DNA repair and recombination proteins [BR:
bmoj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HC660_11180 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QJC95595
LinkDB
All DBs
Position
1140639..1144139
Genome browser
AA seq
1166 aa
AA seq
DB search
MGAEFLVGRSGSGKTKLIIDSIQDELRRAPFGKPIIFLVPDQMTFLMEYELAKTPDTGGM
IRAQVFSFSRLAWRVLQHTGGMSRPFLTSTGVQMLLRKLIEEHKQEFKVYQKASDKSGFT
AQVERMLTEFKRYCLEPEDIRRMADSGTASEYRGERVLSEKLHDLSILYQQMEKSLEGQY
LHSEDYLTLLAEHIPQAEDLKGAHVYVDGFYQFTPQEFRVLEQLMLQAEHITFSLTADKP
SHEGEPQELDLFRMTGKTYYRLHQTAKELNLDITYKELDGLKRHKRVPELAHLEAQYEAR
PVIPFAEKQEAFTVMQAANRRAELEGIAREIHSLVREKGYRYKDVAILARQPEDYKDMVK
EVFADYEIPYFIDGKTSMMNHPLVEFIRSSLDVLKGNWRYEAVFRCVKTELLFPLNEPKA
KVREQVDQLENYCIAYGIKGDRWTKGDRFHYRRFVSLDDEFAQTDQEIEMENMLNDTRDW
IVPPLFQLQKRMKKAKTVQEKAEALYRYLEETDVPLKLDQERQRAEEDGRIIEAQQHQQA
WDAVIQLLEEFVEMMGEDEISLDLFQQMMETGAESLTFSLIPPALDQVFVGNMDLSRIYG
TSCTFVVGANDGVLPARPDENGVLSDDDREWLKTIGIELSSGGRERLLDEHFLIYMALSS
PSDRLYVTYPIADAEGKTLLPSIVIKRLEELFPQHRERLLTNEPEQVSDEEQLMYLVNKS
VAQSYTASQLRLWTREYEISDVWWSAYNALMNEPDRLESKKLFSSLFFRNEVKQLERSVS
RQLYGERIQGSVSRMETFNACPFSHFASHGLHLKERQFFKLEAPDIGQLFHSSLKLISDR
LREQKLDWRDLTKEQCELFSYDAVERLAPKLQKEILLSSNRHYYVKEKLQKIVTRVSGIL
SEHAKASGFVPIGLELGFGGKGPLPPLTFKLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDKGLDLAEVYYGLALQMLTYLDLSITHSLDWLGMKATPAGVLYFHIHDPMIQSNL
PLGLDEIEQEIFKKFKMKGLLLGDQEAIRLMDTTLQEGRSNIINAGLKKDGSLRSDSAAV
GEKEFELLTKHVRRTFQEAGEQITDGRVSIEPYKMKNKTPCTYCAFKSVCQFDESLEENE
YRQLKAEKDKTVLDWIKKEADGNEHS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttgggagcagagtttttagtaggcaggtccgggagtggaaaaacgaagctgatcatcgac
agcattcaagatgaactgcgccgggctccattcgggaaaccgatcatttttctagtcccg
gatcaaatgacgtttttaatggaatacgagcttgctaaaacgcctgatacgggcggcatg
attcgtgctcaagtcttcagcttttcacgactggcctggcgcgtcctccagcatacggga
ggaatgagcaggccgtttcttacgagcacgggcgtacagatgctcctgcggaagctcatt
gaagagcacaaacaggagtttaaagtctatcaaaaagcaagtgacaaaagcggttttacc
gcacaggtagaacggatgctgactgagtttaagagatactgtctggaaccggaagatatt
cgccggatggcggatagcggaacagcttccgagtatcgaggggaacgtgttttatctgag
aagcttcatgatttatcgatcctgtaccagcagatggaaaaaagccttgaaggtcagtat
cttcattctgaggattatttgacactattggcagagcatatcccgcaggcggaagatttg
aaaggggcacatgtctatgtagacggcttttatcagtttacaccgcaggaattcagggtg
ttagagcagcttatgcttcaggcagagcatatcacgttttcactcacagcggacaagccg
tcacatgagggggagccgcaggaacttgatttgttcagaatgacgggaaaaacgtattat
cgcctgcaccagacggcaaaggaactgaatctggacatcacctataaagagcttgatgga
ttaaaacggcacaagcgcgtaccggaattagcccatttggaagcacagtatgaagcgcgt
ccggttattccgtttgctgagaaacaagaggcttttaccgtgatgcaggccgcaaacaga
cgggcagagctggaaggtattgcccgggaaatccatagtcttgtcagagagaagggctac
cgttacaaggatgtggcgattttagcgcgtcagccggaagactacaaggatatggtcaag
gaagtatttgcagattacgagattccttattttattgacgggaaaacgtctatgatgaac
cacccgttagtggagtttattcggtcaagccttgacgtattaaaggggaattggcgttat
gaagcggtgttccgctgcgtgaaaaccgaactgttattcccgcttaacgagccgaaggcc
aaggtaagagagcaggttgatcagctggagaattactgtatcgcttacggcatcaaaggc
gatcgctggacaaagggcgaccgtttccactacagacgttttgtgtcgctagatgatgaa
tttgcgcagaccgatcaagaaattgaaatggaaaacatgctgaatgacacgcgcgattgg
attgttccgccgctgttccagctgcagaaacgaatgaaaaaagcaaaaacggttcaagag
aaggcggaggcgctttaccgttatttagaagagacggatgtgccgctgaagctggatcag
gaaagacagcgggctgaggaagacggcagaatcattgaagcacagcagcatcagcaggca
tgggacgctgtcattcagctgcttgaggagtttgtggaaatgatgggcgaagatgaaatt
tctcttgatttgtttcagcagatgatggaaaccggtgcagagtcactgacattctctctc
attcctccggcgcttgatcaggtgtttgtcggcaatatggatttgtccagaatatacggt
acctcatgtacctttgtggttggggcaaacgacggcgtcctgccggctcgccctgatgaa
aatggcgtgctgtcggatgatgatcgtgagtggctgaagacgataggtattgagctttcc
tccggcgggcgggagcgtctgcttgatgagcatttcctgatctatatggcgctttctagc
ccatctgaccgcctttatgtgacgtatccgattgctgatgcggaaggaaaaacgcttttg
ccgtcgattgtcatcaagcggctggaagaactgtttccgcagcatcgcgagcgtctattg
acaaatgaaccggagcaggtcagcgatgaggaacagctaatgtaccttgtcaataaaagc
gtggcgcaatcatacaccgctagccagctcagattatggacgagggaatatgagatcagc
gacgtctggtggagcgcgtacaatgcgctgatgaatgaacctgacaggctggagtcgaaa
aagcttttctcaagcctgtttttccgcaatgaagtcaagcagcttgaacgttctgtatcg
agacagctctatggtgaacgtattcaagggagcgtgtcgaggatggaaacctttaacgct
tgtcccttctcccattttgcgtcccacgggctgcatctgaaggaacgtcaatttttcaag
cttgaagcaccggatatcgggcagctctttcattccagtttaaaactgatttcagaccgg
cttcgtgagcaaaaattagattggcgcgacctaacgaaggagcagtgcgagctgttttct
tatgacgcggtcgagcggctggcgccgaagctgcaaaaagaaattctgctcagttcaaac
cggcattattacgtgaaggaaaaactgcagaaaattgtgacacgcgtgtccggcatttta
agcgagcatgcgaaagcgagcggattcgtgccgatcggccttgaattgggctttggcgga
aagggcccgctcccgccgcttacctttaagctgaaaaacggctgtacgatggagctcgtc
gggcggattgaccgcgtggataaagcggaaagctctaaaggcctgctcctccggattgtc
gattataaatccagtgataaaggccttgacttggcggaagtgtattacggacttgcgctg
caaatgctgacgtatctggatttatcgattacacattcattagactggctaggaatgaaa
gccacgccggccggggtgctgtatttccatattcatgacccgatgatacaatcgaatctt
ccgcttggacttgatgagattgaacaggaaatttttaagaaatttaagatgaagggcctc
ctcctcggtgatcaggaggcgattcgcctcatggatacaacccttcaagaaggaagatca
aatatcatcaatgcgggcttgaagaaagacggctctctcagatcggattcagcagcagtc
ggtgaaaaagaatttgagctgttgacgaagcatgtgcgccgtaccttccaagaagcaggc
gagcaaatcactgacgggcgcgtatccattgagccgtataaaatgaagaacaagacacct
tgcacatactgtgcgtttaaatcagtatgccaatttgatgaatcattagaagaaaacgag
tatcgtcagttaaaggccgaaaaggacaagacggtacttgattggataaagaaggaggct
gatggcaatgaacattcctaa
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integrated database retrieval system
